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Name : smpB (HCBAA847_1203) Accession : YP_007601068.1 Strain : Helicobacter cinaedi ATCC BAA-847 Genome accession: NC_020555 Putative virulence/resistance : Unknown Product : ssrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1175894 - 1176361 bp Length : 468 bp Strand : - Note : similiar to HCN_0785 of H. cinaedi PAGU611 DNA sequence : ATGCAGGAAAAAATCATTGCCAAGAATAAAAAGGCGTTTTTTGATTATGAGATTTTGCAGACTTTAGAATCTGGCATTGC TTTGCTTGGTAGCGAGGTGAAAAGTATCCGTGCTGGGCGGGTTAATCTCAAAGATAGCTTTGTGAGAATCGTGCGTGGGG AGGTGTTTTTGTTTAACGCACATATTTCATTTTTGGAAACGACTTTTACGCATTTTAAGCCAAATGAGCGGCGAGAAAGG AAGCTCTTGCTTCATAGAAGTGAGATTGATAAGCTTTTTGGCAGTGTGAGTAAGGAAGGGCTATCCATCGTGCCTTTAAG TATGTATTTAAACAAAAGAAATAGAATCAAGCTGTCAATCGCCCTTGTGCGTGGGAAAAAGCTCTATGATAAGCGTGAGA GTATAAAGAAAAAAACGCTTGAAAGAGAGGCTAGGGCAAATATGAAAGACTATGGGAAAAAGATTTAG Protein sequence : MQEKIIAKNKKAFFDYEILQTLESGIALLGSEVKSIRAGRVNLKDSFVRIVRGEVFLFNAHISFLETTFTHFKPNERRER KLLLHRSEIDKLFGSVSKEGLSIVPLSMYLNKRNRIKLSIALVRGKKLYDKRESIKKKTLEREARANMKDYGKKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 9e-24 | 46 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-24 | 45 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 5e-23 | 43 |
