Gene Information

Name : hemC (HCBAA847_1094)
Accession : YP_007600962.1
Strain : Helicobacter cinaedi ATCC BAA-847
Genome accession: NC_020555
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1063504 - 1064475 bp
Length : 972 bp
Strand : -
Note : similiar to HCN_0885 of H. cinaedi PAGU611

DNA sequence : 
ATGCAAAATGTTGCGGATAGAAAACTTATCATCGGCACACGCGGAAGTGCGTTGGCATTGTGGCAAGCTCAATATGTGAA
AAATCGCTTGAAAGATGAATGTCGGCTAGATTCAGAATTTAAGATTATCAAAACGCAAGGCGATAAAATACTTGATGTGC
CATTGGCAAAAATCGGTGGCAAGGGGCTTTTCACAAAGGAGCTAGAACAAAAGCTTTTGGATAAAGAGATTGATTTAGCT
GTGCATAGCTTAAAAGATGTGCCCGTGGAGATATTGCCCTTGCTTGATTTGGCGGCAATTACAGAGCGAGAGGATTGCAG
GGATTGTTTTTTAAGTATGAAATATGAGAGTTTAGAATCTTTGTCGCAAGGTGCTAGGGTGGGGACAACTTCACTTCGCC
GCTCTATGCAGATTAAAGCTTTTCGTGCGGATTTGGATACGCTAAGTTTGCGTGGGAATATACAAACGCGTTTAGAAAAG
CTCAAAAATGGCGTATTTGATGCGATTATCTTAGCTCAAGCGGGTGTAAAGCGGCTAGGCATTGATGTGAAAAAAAATGA
TATGGGGATTTGCCATATTGTGCCTTTGGATTTTATGATACCTGCTATGGGACAGGGGGCTTTGGGTATTGAGATGAGAA
AGGATAGCCCATATTTTGAGACTATCTCAAGGCTTACACATAAGAGAAGTGCGTTGTGTGTGAGTGCGGAACGCTCTTTT
GTGCGGGAACTTGAGGGTGGCTGTCAAGTGCCAATAGGTGTGCAAGCAATGTATGAAAATGGGATTTTAAGGCTTAGGGC
TATGGTGGGATTGCCAAATGGGCAGGAAATTTTGCAGGAGAGCTTGGAGGATTCTATATTGGAAGAAGACAAGGCAAAGG
CAGAATCTCTTGGTAAAAATCTCGCTCAAAGCTTTATTGCTAAAGGGGCCAAGGAGATTCTATCTCGTGCAAGAGATATG
GCATTTGCGTAA

Protein sequence : 
MQNVADRKLIIGTRGSALALWQAQYVKNRLKDECRLDSEFKIIKTQGDKILDVPLAKIGGKGLFTKELEQKLLDKEIDLA
VHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYESLESLSQGARVGTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEK
LKNGVFDAIILAQAGVKRLGIDVKKNDMGICHIVPLDFMIPAMGQGALGIEMRKDSPYFETISRLTHKRSALCVSAERSF
VRELEGGCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAESLGKNLAQSFIAKGAKEILSRARDM
AFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-56 49
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-56 49