Gene Information

Name : WSI_03265 (WSI_03265)
Accession : YP_007599243.1
Strain : Candidatus Liberibacter asiaticus gxpsy
Genome accession: NC_020549
Putative virulence/resistance : Virulence
Product : ABC transporter nucleotide binding/ATPase protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 726598 - 727440 bp
Length : 843 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence :
ATGAAAACAGCTGTCGCTTCCACGAAAGGTGGACTAGAATTAAAAGATATATCAGTAACATATCCTAATGGTTATTGCGC
TTTGGAAGACGTCAATCTTTTTATTCCCGAGAATACAATAACTGCCTTAATTGGCCTAAATGGGGCTGGAAAATCTACTT
TGTTTCAAGCTATCATGGGGCTTATCCCACTAGATAAAGGGTCAATATCCATCTTCAATCAAACCGTGGAAAATGCGCTG
AAAGCAGATCTCATTGCTTATATACCCCAAACAGAATCCATAGATTGGACTTTTCCTATTCTCGTAGAAGATGTTGTGAT
GATGGGTCGTTACAAACATATGAACTGGCGACGTGTAGCGTCAAACAACGATTATCGAATCGTAACGGAGGCATTAGAAA
ACGTAGGGATGTCTTCTATGCGCCAAAGACAAATCGGCGAACTTTCCATAGGACAGCAAAAGCGCGTTTTTCTTGCCCGT
GCACTCGCCCAAAAAAGCCAGGTTATCATCATGGACGAACCTTTTGCAGCAATTGATTTTAAGACGGAAAGAGAAATGAT
TTTTCTCTTAAAATCGTTACTCAACGAAGATATAATGATCTTGGTTTCTACGCATAATATTAATTCCATTCCTTCTTTTT
GTGACCGAACTATTTTTCTCAAAAAGACAGTGCTCGCTTCTGGGTTAACATCGGATATCTTTAATGAGGATAATATTCAA
AAAACCTTTGGAGCTCAAGTATCTCCTCAGTCGAGTATCTTGAATGAGAGTAATATTCAAACAACTTTTAAAGCTGAGGT
ATATCCTCAAATAAATTCCACCATGTGCATAAAAAAAAGCTGA

Protein sequence :
MKTAVASTKGGLELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVENAL
KADLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIVTEALENVGMSSMRQRQIGELSIGQQKRVFLAR
ALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKKTVLASGLTSDIFNEDNIQ
KTFGAQVSPQSSILNESNIQTTFKAEVYPQINSTMCIKKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-62 52
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-62 52
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-62 52
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-63 52
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-63 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WSI_03265 YP_007599243.1 ABC transporter nucleotide binding/ATPase protein BAC0350 Protein 6e-63 52
WSI_03265 YP_007599243.1 ABC transporter nucleotide binding/ATPase protein BAC0440 Protein 7e-60 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WSI_03265 YP_007599243.1 ABC transporter nucleotide binding/ATPase protein VFG0526 Protein 5e-63 52