|
Name : lysS (WSI_04930) Accession : YP_007599574.1 Strain : Candidatus Liberibacter asiaticus gxpsy Genome accession: NC_020549 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1106791 - 1108299 bp Length : 1509 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAATAATACTCTTACTCCCGAATCTTTATCTTCTAATTCTATCGAAGTTCGCTCTCAAAAGTTGAATATGTTGCGAAA ATCTCTAGCAGAAGTTTATCCTGCCCATTTTCATCGTGATATAACAAATGCTGAAGTGCGTGAAAAATATTCTCATCTTC AAAATGATGAGAAATCACAAGATATGATTACTGTTGCTGGACGCGTCTACTCTTCCCGAAATTCTGGAATGTTTATGGAT ATTCACGATGCAAGTGGTAAAATTCAGATTTTTACTCATAAAGATACAGCCGATCAAGATTCGCAAAATTTATTATCTAT GATTGATATCGGTGACATTATAGGAATAACAGGACAAGTACGTCGCACTAAACGTGGCGAACTCACAGTGAACGCACAAA AAATAATAATGCTCAGCAAAGCATTAAATTCTATCCCAGAAACATATTATGGATTATCTGATGTCGAAATCCGCTATCGT AAAAGATATCTTGATATTATAAGCAACTCCGATTCTAAAATACGTTTCCAACAAAGAAGCCTTCTTATTTCCCAAATACG CCATTTTATGGAAAAAAAAGGATTCATGGAAGTAGAGACTCCTATATTACAACCTATTTACGGAGGAGCTACCGCTGATC CATTCAAAACGCATCATAATATTCTAAAAGCCGATATGTATCTACGTATTGCACCCGAACTTTACCTTAAACGCGTTTTA ATATCAGGACTGACTGACCAAGTATTTGAATTAAATCGTAATTTTCGTAACGAAGGAGTGTCCTCACGGCATAATCCAGA ATTTACAATGATCGAAGCCTATTGGGCTTATACTGATTATCGAGATATGATGAAACTAGTCGAAGATCTTTGTCATAATC TTGCTAAAACTCTTCATGGTACAACAGATATTCCATTTGGAGAAAAAGTCATTTCTTTCAAAGCACCGTTTGCATGTAAA TCTATGCTTCAGTTGGTCAAGGAAGCAACAGGACTTGATTTTATGCTTTTAAAAAGCGATCAAGAAGCACGTGTTGCAGC ACAAAGTATTGGGATTACAGTAGAAAACGATGCTCTATGGGGTGAAGTCATGATGACAATTTTCGAAGAAAAAATCGAAA AAAATATTGTGAATCCAACGCATATTACAGATTTTCCCAAAGATATTTCACCTTTTGCAAAAGAAGTGGCGGGCGAAAAG CGTCTGGTAGAGCGTTTTGAAACCTATTGTAATGGATGGGAAATATGTAATGCATTTTCTGAACTCAATGATCCCGTAGA GCAACGCATACGCATGGAACAACAAGTTGAACAATCCCATCAACGTGGAGAACACACTATTCTTGATGAAGATTTTTTAG ATGCAATGACCTACGGTATGCCTCCAGCAAGTGGATTAGGTCTTGGTATAGATCGCCTAATCATGCTATTGACCAATGCC CCTTCTATTCGAGATGTTATCCTCTTTCCAGCGCAGCGTGTGAAAAATGGTAGTCGGAAAACAGAATAA Protein sequence : MNNTLTPESLSSNSIEVRSQKLNMLRKSLAEVYPAHFHRDITNAEVREKYSHLQNDEKSQDMITVAGRVYSSRNSGMFMD IHDASGKIQIFTHKDTADQDSQNLLSMIDIGDIIGITGQVRRTKRGELTVNAQKIIMLSKALNSIPETYYGLSDVEIRYR KRYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETPILQPIYGGATADPFKTHHNILKADMYLRIAPELYLKRVL ISGLTDQVFELNRNFRNEGVSSRHNPEFTMIEAYWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPFGEKVISFKAPFACK SMLQLVKEATGLDFMLLKSDQEARVAAQSIGITVENDALWGEVMMTIFEEKIEKNIVNPTHITDFPKDISPFAKEVAGEK RLVERFETYCNGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNA PSIRDVILFPAQRVKNGSRKTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-93 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007599574.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-93 | 44 |
