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Name : lysS (ABD1_09510) Accession : YP_007595502.1 Strain : Acinetobacter baumannii D1279779 Genome accession: NC_020547 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1060160 - 1061722 bp Length : 1563 bp Strand : + Note : - DNA sequence : ATGCCACTTCATTTTTACTTAACCGAGGCAGAGATGACGCAACAAAACGCTCAATCGACTTCTGAACCAACTATTTCCGA AAACGATTTAATTGCACAGCGTCATGCCAAATTAAAGCAAATCCAAGATGTTGCAAAGGAAACTGGAAAGAGTCCTTGGC CAAATACATTCAAACGTGAACATTACGCTGCTGATTTACAAGAACAATTTAAAGATCAGTCTAAAGAACAAATCGAAAGC GCTGAACATGTTTATGTAAAAGTTGCTGGCCGTGTCATGTTAAACCGTGGTTCTTTCATGGTGATTCAAGACATGACTGG TCGTATCCAATTATATGTTGACCGTAAGGGTTTACCAAAAGATACGCTCGAAACTATTAAAGGTTTAGACCTTGGCGATA TTATTGCTGCTGAAGGTTATATCGGCCGTTCGGGCAAAGGTGACTTATATGTACACCTTGAAGGTTTTGAACTTCTTACA AAATCGCTTCGTCCATTGCCGGATAAATTTCATGGTTTGAACGACACAGAAGTTAAATATCGTAAGCGTTATCTTGACTT AATTGTGAATGAAGAAACGCGTAAGACTTTTGAAATTCGTGCCAAAGTCGTTGCAGGTATTCGCGCATTTTTAACTAATG AACGTTTCATGGAAGTTGAAACGCCAATGATGCATGTGATTCCGGGTGGCGCGTCTGCACGTCCGTTTGAAACGCATCAT AATGCTTTAGATATGCCATTATTCTTGCGTATCGCACCGGAGCTTTATTTAAAGCGTTTAGTAGTGGGTGGTTTTGAGCG TGTGTTCGAAATTAACCGTAACTTCCGTAATGAAGGGGTGTCAACACGTCATAACCCTGAATTTACCATGATCGAGTTTT ATCAGGCATATGCTGATTATAAAGACTTGATGGCTTTAACTGAAAACATGCTTGAAAAGTTAGCTCTTGATATTTTAGGT ACAACTGATGTGCCTTACCAAGGTGAAGTGTTTAGCTTTAAAGGACCATTCAAGAAAATCTCTATGTTTGATGCGATTTT GGAGAATAATCCGCAGTTCACGCCTGAAAATGTAGGCGATCGTGAATTCCTTGCAAAATTTGTTCGTGAGGAATTAAAAG AAGAAGTTAAACCTGGTTTTGGTTTAGGTAAGCTTCAAACAATCGTATTTGAAGAAACGGTTGAGACTAAACTTCGTCAG CCTACTTTTATTACTGAGTACCCAGCAGAGACTTCTCCACTTGCTCGCCGTAATGATGATAATCCGCACATTACTGATCG TTTTGAGTTCTTTATTGGTGGCCGTGAATTAGCAAACGGCTTTAGTGAGTTAAATGATCCGATTGATCAGGCTGAACGTT TCCAAGCGCAAGTTGCTGAAAAAGATGCTGGTGATGATGAAGCAATGCATTACGATGCAGAGTTTGTTGAAGCACTCGAA TATGGTTTACCTCCAACAGCGGGTGAAGGTATTGGTATTGACCGTTTGGTTATGCTTTTTGCAGATGCACCAAGTATTCG TGATGTGATTTTGTTCCCGCATATGCGTCGTAAAGAAGGTTAA Protein sequence : MPLHFYLTEAEMTQQNAQSTSEPTISENDLIAQRHAKLKQIQDVAKETGKSPWPNTFKREHYAADLQEQFKDQSKEQIES AEHVYVKVAGRVMLNRGSFMVIQDMTGRIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYIGRSGKGDLYVHLEGFELLT KSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHH NALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILG TTDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLRQ PTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFVEALE YGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRRKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-128 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007595502.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-128 | 55 |
