Gene Information

Name : ABD1_09390 (ABD1_09390)
Accession : YP_007595490.1
Strain : Acinetobacter baumannii D1279779
Genome accession: NC_020547
Putative virulence/resistance : Resistance
Product : ABC superfamily transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1047381 - 1048073 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGCCACAACCTATCATTGCTGCCCATCAAGTTACACAAACTATTCAGATTAACCAAAATCAATTTACGATTTTAAAAAA
TATTGATTTAGAGATTTATGAAGGGGAGCAGGTAGCAATTACAGGACGTTCTGGTTCAGGAAAATCAACTTTACTGGGTA
TTTTAGCGACTTTAGACCAACCCTCTGAAGGTGAGGTGTGGTTATGTGGTCAGGCGGTTCATGAGTTAACAGAAGAACAG
CGCGCTCAAATTCGAATGCAGCATATTGGTTTTGTATTTCAGTCTTTCCAGCTTTTGCCACAGTTAAGTGCCCTTGAAAA
TGTGATGTTACCGCTCCGGTTACGTAAAGATTTTGATTATAAAATTGCTGAACAAAAAGCCTTAGATTGGCTGCATCGGG
TAGGATTAAGCCGTCAAGCTGAACAAACGCCTAAGGTCTTATCTGGCGGCGAGCAACAACGTGTGGCAATTGCTCGGGCT
CTCATTGCCGAGCCACAAATTATTTTTGCCGATGAGCCGACCGGAAACCTCGATGGTCAAACCGCCCAAGAAATTGAAAC
TCTTCTTTTTGATTTAAATCGAGAGCTTGGTACCACCCTTATTTTGGTCACACATGATCGTAATTTGGCAGCACTTTGCC
AACGACATGTGGAGTTAGATGATGGCCGACTAAAGACGGTACAGGGTGGTTAA

Protein sequence : 
MPQPIIAAHQVTQTIQINQNQFTILKNIDLEIYEGEQVAITGRSGSGKSTLLGILATLDQPSEGEVWLCGQAVHELTEEQ
RAQIRMQHIGFVFQSFQLLPQLSALENVMLPLRLRKDFDYKIAEQKALDWLHRVGLSRQAEQTPKVLSGGEQQRVAIARA
LIAEPQIIFADEPTGNLDGQTAQEIETLLFDLNRELGTTLILVTHDRNLAALCQRHVELDDGRLKTVQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABD1_09390 YP_007595490.1 ABC superfamily transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-39 51
ABD1_09390 YP_007595490.1 ABC superfamily transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-33 48
ABD1_09390 YP_007595490.1 ABC superfamily transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-25 42
ABD1_09390 YP_007595490.1 ABC superfamily transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-33 42
ABD1_09390 YP_007595490.1 ABC superfamily transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-31 41