Gene Information

Name : tolC (ABD1_02390)
Accession : YP_007594791.1
Strain : Acinetobacter baumannii D1279779
Genome accession: NC_020547
Putative virulence/resistance : Resistance
Product : type I secretion outer membrane protein precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 274826 - 276157 bp
Length : 1332 bp
Strand : +
Note : -

DNA sequence :
ATGCTTGTTGCGGGTTTATGGAGTTTTACATCGTCGAGTTTTGCTCTAGATTTAGTTGAAACTTATGAGCGCGCAAAACT
AAATGATCCGACGTGGCAAGCGAATCAACAACAGTTTGAAGCAGATCAGCTTAATTTAGGCTTAGCAACAGGCGCTTTAT
TACCAACAGTTACATTGTCTGGAAATATTACCCGTAATCGACAAACGGTAAAGCGTTCAAATTTTCCCGGTGTTGATCAG
GAAGGACTTTCCGATGCTTTGGTAAGTAATACATCGACTACCAAACAGGCTACTTTATCTGCCCGTCAGCCTCTTTTTCG
TATGGATGCATGGGAAGGTTATAAACAGGTTAAAACTTCTGTTGCTCTTAGTGAAGTTACTTTAAGACTGCAAAAACAAG
ATCATGTTTTAAATGTAGCTGAAGCCTATTTTAATGTACTGCGTCAGCAGGCACTTACCGCTGCATATTTACAAGAAGAA
AAAGCCTTGCTTGAACAGCTCAATATGATGAACGCCAAGCTTAAAGAAGGGTTGGTAGCACGTAGTGATGTGAGTGAAGC
AAATGCCCAATATCAAAATGCCCGAGCCAACCGTATTGCTACCAATGTGCAGCTTCTATTGGCTCAAGAGCAACTATCTG
AATATATTGGTCCTTATCAAGATAGGCTTGCTGTATTGAGAAGTGATTTTATCTTTCAAAAACCTTATCCGGCACAGCTC
GATGAGTGGTTAGGATTAGCCCAACAGCAAAATTTAAAGATTCAACAAGCACGTTTACAAAAGCGATATGCTGAAGATCA
ACGTCGTGTGGAAAAAGCTGCACTTTATCCACAGATAGATGCAGTGGCGAGTTATGGCTATACCAAACAAACGCCAGAAA
CGCTGATTTCGACTGATGGGAAGTTTGATCAGGTCGGGGTAGAGATGAACTGGAACTTATTTAATGGAGGCCGGACTCGA
ACTTCTATTAAAAAAGCCAGTGTGGAGTTAAATAAAGCGCAAGCCCAACTTGATGCGGCCATTCGCCGTGCCAATGTCGA
TGTGAAAAGTGCTTTTATGCAGGTAGATACCGACCGAGCAAAACTTGAAGCAAGAAAGGCGGCAATGGACTCTTCAGCAC
TTGTTTCTCAAGCTTCAAAAGCAAGTTATAACGAGGGCTTAAAAAGTATGGTCGATGTTTTATTGGCGCAGCGTAATGCT
TTTTCAGCAAAACAGGATTATCTTAATGCTCAGTATGACTATTTATTAAATGTATTACGTTTAAAAGCGGCTGTAGGTCA
GCTAGGGGAAAAAGATCTAGTTGAATTAAACAGCTGGTTAACGTATCAGTAA

Protein sequence :
MLVAGLWSFTSSSFALDLVETYERAKLNDPTWQANQQQFEADQLNLGLATGALLPTVTLSGNITRNRQTVKRSNFPGVDQ
EGLSDALVSNTSTTKQATLSARQPLFRMDAWEGYKQVKTSVALSEVTLRLQKQDHVLNVAEAYFNVLRQQALTAAYLQEE
KALLEQLNMMNAKLKEGLVARSDVSEANAQYQNARANRIATNVQLLLAQEQLSEYIGPYQDRLAVLRSDFIFQKPYPAQL
DEWLGLAQQQNLKIQQARLQKRYAEDQRRVEKAALYPQIDAVASYGYTKQTPETLISTDGKFDQVGVEMNWNLFNGGRTR
TSIKKASVELNKAQAQLDAAIRRANVDVKSAFMQVDTDRAKLEARKAAMDSSALVSQASKASYNEGLKSMVDVLLAQRNA
FSAKQDYLNAQYDYLLNVLRLKAAVGQLGEKDLVELNSWLTYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00325 YP_008211651.1 Outer membrane protein Not tested AbaR26 Protein 0.0 99
BJAB07104_00321 YP_008207786.1 Outer membrane protein Not tested AbaR25 Protein 0.0 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tolC YP_007594791.1 type I secretion outer membrane protein precursor NC_011595.7058144.p0 Protein 0.0 99
tolC YP_007594791.1 type I secretion outer membrane protein precursor NC_010410.6003655.p0 Protein 0.0 99
tolC YP_007594791.1 type I secretion outer membrane protein precursor NC_010400.5987140.p0 Protein 0.0 99