Gene Information

Name : D805_0880 (D805_0880)
Accession : YP_007593587.1
Strain : Bifidobacterium thermophilum RBL67
Genome accession: NC_020546
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 1087899 - 1089341 bp
Length : 1443 bp
Strand : +
Note : COG0469 Pyruvate kinase

DNA sequence :
ATGCGTAAAGCAAAGATCGTCGACACGATCGGTCCAGCCACCGAGTCCCTCGAAGGCATCACCAAGCTCGTCGAAGCCGG
TATGGACGTCGCGCGTCTCAACCGCTCCCACGGCACCCCTGAGGATCACCTCAAGGTCTACAACAACGTGCGTGCGGCTT
CCAAGGCGACCGGCCGCAACGTCGCTGCGCTGGTTGACCTGCAGGGTCCGAAGATTCGCTGCGGTTGGTTCAAGAAGAAC
GCCGAAGGCGAAGACAAGGTCGAGCTGACCGAGGGCCAGGAATTCATCATCACCACCGACGACGTCGAGGGCGACGAGCA
CATCACCTCCACCACGTTCAAGGGTCTGCCGGGCGATTGCCATCCTGGCGACCCGATTCTCATCGATGACGGCAAGGTTC
GTCTCGAGGTCACCAAGGTCGAGGGCAACAACGTGTACACCAAGGTTGTTGTGGCCGGCCCGGTTTCCAGCCACAAGGGC
ATCAACCTCCCGGGCGTCGCAGTTTCCCTGCCTGCTCTGACCGAGAAGGACGAAGCCGATCTGCGCTGGGCTATTCGCAC
TGGCGCCGACATCATCGCCATGTCCTTCGTGCGTTTCGCGACCGATATCGATCGCGCCCACGAAATCATGGATGAGGAAG
GCCGTCGCATCCCGATCGTCGCGAAGATCGAGAAGCCGCAGGCTGTGGCGAACCTCGAAGACATCGTCAAGACCTTCGAC
GGCATCATGGTCGCCCGTGGTGATATGGCCGTCGAAATGCCGTTCGAAGAGGTCCCGCTGGTCACTAAGCGCTGCATCGA
GCTGGCTCGCCAGTATGCCAAGCCGGTCATCGTGGCCACCGAAGTGCTCGGTTCCATGGTGCATTCCCCGGTTCCGTCCC
GTGCTGAGGCTTCCGATTGCGCGAACGCCGTGCTTGACGGCGCCGACGCGACCATGACCTCCAACGAGACCGCCGTTGGC
GAGTACCCGACCGAGACCGTCAAGACCATGTCCCGCATCTCCGGTTACGCCACCGAGCACGGCTTCGACCGTATCCCGGC
ACTGAAGAACCTGGATATGTCTAACAGCGGTGCTGTGTCCTCCGCGGCTGTTGACCTGGCTGAGAAGGTCAATGCGAAGG
CCATCGTGGCCTACACCCAGACCGGTAACACCGTGCATCGCGTGTCCCGCGAACGCCCGGCTGCTCCGATCTACGGCCTG
ACCACCAACGAGCACACTTACCACTGGCTGGCTCTGAGCTGGGGCACCGAAGCGTTCCTGCTTGATGAGGACTACCACGA
CAAGAACCGCAGTGACCTCATGGTGTTCACCGACAAGGTCTTGCGTGCCGCGGGCAAGGTCGCTGATGGCGATCGTATCG
TCGTGCTGAGCTCCGCACAGGGCGAGCATCGTCCGGGCAGCACCGATTCCATCTACGTGCACACCGTCGGCGCTTGCGAC
TGA

Protein sequence :
MRKAKIVDTIGPATESLEGITKLVEAGMDVARLNRSHGTPEDHLKVYNNVRAASKATGRNVAALVDLQGPKIRCGWFKKN
AEGEDKVELTEGQEFIITTDDVEGDEHITSTTFKGLPGDCHPGDPILIDDGKVRLEVTKVEGNNVYTKVVVAGPVSSHKG
INLPGVAVSLPALTEKDEADLRWAIRTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPIVAKIEKPQAVANLEDIVKTFD
GIMVARGDMAVEMPFEEVPLVTKRCIELARQYAKPVIVATEVLGSMVHSPVPSRAEASDCANAVLDGADATMTSNETAVG
EYPTETVKTMSRISGYATEHGFDRIPALKNLDMSNSGAVSSAAVDLAEKVNAKAIVAYTQTGNTVHRVSRERPAAPIYGL
TTNEHTYHWLALSWGTEAFLLDEDYHDKNRSDLMVFTDKVLRAAGKVADGDRIVVLSSAQGEHRPGSTDSIYVHTVGACD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-62 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-62 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-62 43
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-62 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D805_0880 YP_007593587.1 pyruvate kinase VFG0479 Protein 7e-63 43