Gene Information

Name : D805_0239 (D805_0239)
Accession : YP_007592946.1
Strain : Bifidobacterium thermophilum RBL67
Genome accession: NC_020546
Putative virulence/resistance : Resistance
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 279153 - 279872 bp
Length : 720 bp
Strand : +
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence :

GTGAAAAACACGATGGTGACGCCGCTCATCGAACTTGAGCACGTTGGCAGGAGATACTCCGGTCCCGTGCCAACTGAAGC
ATTGCGTGATGTTTCGCTGTCCGTTATGCCAGGCGAGTTTGTTGCGATTCTTGGTCCCTCGGGGGCCGGTAAATCGACGT
TGCTCAACATCCTTGGCCTGCTTGATGCTCCGACCTGTGGCACGTACCGATTCAACGCTTTGAGAACAGACGATATGCCT
GAGCGAAGAAGATCGCAAATACGAGCCCAATACATCGGGTTCGTATTCCAGGCTTTTCATCTTCTTCCATATCGCAGTGT
CGAGGAGAATGTCGCGATGTCGGGGTTGTATGCAGGGGTCGCGGCTCAAGAACGTACGTTGCGTGCCAGACGAGCGCTCT
CCAAAGTAGGGCTGGAGCATAAGGCGAACGCCGGTCCATTGGATTTGTCCGGAGGCGAACGTCAGCGTGTCGCCATTGCG
AGGGCCATTTGCAACAACCCAAGGGTTGTGGTGTGTGACGAGCCGACAGGAAACTTGGATTCACGGCGCGCGGAGTCAAT
CATGGAGATCTTCAGTAGTCTGAATCGTGAAGGTCAAACCGTAGTGATGGTAACGCATAATGAAGCGCAGGCGCGGTTCG
CCCATCGCACGATACACATGAGCGACGGGATGATTATCGCGGACAGCGCACAGCCTGTGGACAAGGACACCGATGAATAG

Protein sequence :

MKNTMVTPLIELEHVGRRYSGPVPTEALRDVSLSVMPGEFVAILGPSGAGKSTLLNILGLLDAPTCGTYRFNALRTDDMP
ERRRSQIRAQYIGFVFQAFHLLPYRSVEENVAMSGLYAGVAAQERTLRARRALSKVGLEHKANAGPLDLSGGERQRVAIA
RAICNNPRVVVCDEPTGNLDSRRAESIMEIFSSLNREGQTVVMVTHNEAQARFAHRTIHMSDGMIIADSAQPVDKDTDE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	ABA47263.1	ABC transporter	Not tested	S-PAI	Protein	6e-19	44

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
D805_0239	YP_007592946.1	ABC transporter related protein	NC_008702.1.4606598.	Protein	3e-37	48
D805_0239	YP_007592946.1	ABC transporter related protein	NC_012469.1.7686878.	Protein	3e-45	45