Gene Information

Name : D805_1809 (D805_1809)
Accession : YP_007594516.1
Strain : Bifidobacterium thermophilum RBL67
Genome accession: NC_020546
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2241526 - 2242317 bp
Length : 792 bp
Strand : +
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence :
ATGACCCATCATCCGAATCATCATCCGAAAGGCATCATCATGACGACACAAATCGGGCAGCCCATAGTGGACATCCAGGA
CGTCTCCAAAACCTTCGCGAACCGAACCGTGCTGGAACATGTCACGGCATCCGTGGCATGTGGGGAGAGCCTAGCGATTA
CCGGCCCATCAGGCTCGGGAAAATCAACACTGCTCAACATGATTGGACTACTGGACGAGCCGACAACAGGTCGCATCTGC
TTTGAGGGCTACGCATATCCCGGCATGAATTCCGCCGCAGCGACCCGTATGCGTCGCAACCGCATCAACTACCTGTTCCA
GTCCTACGCCCTCATCACCGATATCACCGCATTGGACAATGTGCTACTCGGATTGAAATATGCGCCAGGCAGTACAGAAG
ATAAGCGCGACAACGCTGTAAATCTGCTTCAACGACTCGGCTTGGGACAAGTTATCAACGACCGTGTCATGACACTTTCC
GGCGGCGAACAACAACGCGTTGCTCTCGCCCGATGCATGCTCAAGCCCGGAGACCTGATTCTCGCAGATGAACCAACAGG
AGCCCTTGATCCACATCTTGCCCATGACATGTTCAGCCAGATGCTGCAACTCCAACGCGATTTCGGGAAGACCTTGGTTG
TTGTCACGCACGACGAAACAATCGCCCAGCGCTGCGACAGGCGACTGTGCCTCGCACGGGAGGCGTCAGGCAGAACCACG
CTGGAGGCGGTCCGAGAGATTGCTGAAACCGGTGCGGCGCAGATGTGTAACGCAATCGCAAACCCTAAGTAG

Protein sequence :
MTHHPNHHPKGIIMTTQIGQPIVDIQDVSKTFANRTVLEHVTASVACGESLAITGPSGSGKSTLLNMIGLLDEPTTGRIC
FEGYAYPGMNSAAATRMRRNRINYLFQSYALITDITALDNVLLGLKYAPGSTEDKRDNAVNLLQRLGLGQVINDRVMTLS
GGEQQRVALARCMLKPGDLILADEPTGALDPHLAHDMFSQMLQLQRDFGKTLVVVTHDETIAQRCDRRLCLAREASGRTT
LEAVREIAETGAAQMCNAIANPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D805_1809 YP_007594516.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-38 43