|
Name : D805_1594 (D805_1594) Accession : YP_007594301.1 Strain : Bifidobacterium thermophilum RBL67 Genome accession: NC_020546 Putative virulence/resistance : Virulence Product : chaperone clpB Function : - COG functional category : - COG ID : - EC number : - Position : 1965370 - 1968057 bp Length : 2688 bp Strand : - Note : 'COG0542 ATPases with chaperone activity, ATP-binding subunit' DNA sequence : ATGCAAGCGCAATTCACGAATATGGCCCAGGAGGTCATCAGCGACGCCGTACAGAGCGCGTCCGCCGCGGGCAATGCGCA AGTCGAGACGCTGCACGTACTCGATGCGCTGCTTCGCCAGCAGAACGGCGTTGTACCAAGCCTGATCAAGGCCGCAGGGG GAGACATCAAAGCCATCGGCACAGCCGTGCGCAACGGGCTGGTCAACCTGCCCAGCGCCAGCGGGTCAAGCACTACGCAG GCGCAGCCCAGCCGTCAGCTCGAAGCGGTGCTCGTGCAGGCCGAGCAGGAAATGAAGCAGCTCGGGGACGAGTTCATCTC CACCGAGCACCTGCTCATTGCCATTGCCGCGAGCAAACCGAACAAATCCGCTGACATTCTCGAAGCCAACGGGGTGACCG CCGAATCGCTGCGCAAGGCGTTGCCGCAGATCCGCGGCGGCGCGCACGTGACCAGCGCGGACGCGGAAGGCAATTACAAG GCTCTCGAAAAGTATTCGACCGACCTGACCGCCGCCGCGAAGGAAGGAAAGCTTGACCCGGTGATCGGCCGTGATCAGGA GATCCGCCGTGTCATCCAGATTCTGTCCCGCCGCACCAAGAACAACCCGGTGCTGATCGGTGAACCTGGCGTCGGCAAAA CCGCCGTCGTCGAAGGTCTCGCCCAGCGTATTGTCGCCGGGGATGTGCCGAGCACGTTGCGCAACAAGAAACTCATCAGC CTCGACCTGGGTTCCATGGTCGCCGGGTCGAAATACCGCGGCGAATTCGAGGAACGCCTCAAGGCCGTGCTCAATGAGAT CAAGAACGCGAACGGGCAGATCATCACCTTCATCGACGAGATTCACACCATCGTCGGAGCCGGTGCTGCAGAAGGCTCGA TGGACGCGGGCAACATGCTCAAGCCGATGCTTGCGCGCGGTGAACTGCGGCTGATCGGCGCCACCACGCTTGATGAATAC CGCGAGAACATCGAAAGGGACCCGGCTCTTGAACGCCGCTTCCAGCAGGTGTTCGTCGGTGAGCCGAGCGTCGAGGACAC TATCGCGATCCTGCGCGGTATCGCGCCCAAGTACGAGGCCCACCACAAGGTGACCATTGGCGATGACGCGCTGGTGGCCG CAGCTCAGCTGTCCAACAGGTACATCAGCGGGCGTCAGCTGCCGGATAAGGCCATCGATTTGGTCGATGAGGCGGCTGCG CACCTGCGTATGGAGCTCGACTCCTCGCCTGAGGAAATCGATGAGCTCAAGCGTCAGGTCGATCGGCTGAAGATGGAACG CGCCTATCTGCTGGGCAACCCGAAGAACGAGAAAGCCGAGCAGAAGAAAGCGGATGCGCTTGACGAGAAGTCGCGTGAAC GCCTCGCCGACCTTGACAAGGAGCTCGCCGACAAAACCGAGAAGCTCAACGGCCTCAACGCCCGCTGGAATATGGAGAAA AGCGGGCACAACAAGGTCGGCGACCTGCGCAAGAAACTCGACGAGCTGCAAGTGGAAGCCGAACGTTGCGAACGCGACGG CGACTATGCGAAGGCCTCGGAAATCCGTTACGGCGAGATTCCGCACATCCAGAAGGAAATCGCCGCCGCCGAGCAGGAGG AACGCGATGCCAAGGAAACCGGCGCCGAGGAGGCCCCGATGGTCCCCGACAAGGTCGATGCGGATTCCATCGCGCAGATT GTGTCCGAATGGACCGGCATTCCTGTCGGCCGCCTGATGCAAGGCGAGAACGAGAAGCTCCTGCACATGGAGGAGTACCT CGGCAAGCGCGTCATCGGTCAGAAAGACGCCATTCGTGCGGTTTCCGACGCGGTGCGTCGTTCGCGTGCCGGCATCTCCG ACCCGAACCGCCCGACCGGATCGTTCCTGTTCCTGGGCCCCACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTCGCC GACTTCCTGTTCGACGACGAGAAGGCCATGGTACGTATCGATATGAGCGAGTACATGGAGAAAGCCTCTGTGTCCCGCCT GATCGGTGCCGCCCCGGGCTATGTCGGCTACGAGGAAGGCGGCCAGCTGACCGAGGCCGTGCGTCGGCGCCCCTACTCGG TGGTGCTGTTCGACGAGGTCGAGAAGGCGAATCCGGAAGTCTTTGACCTGTTGCTGCAGGTGCTGGACGATGGTCGCCTG ACCGATGGCCAAGGCAGAACCGTGGACTTCAAGAACACGATTCTGATCATGACCTCGAACCTCGGTTCGCAATTCTTGGT GCAGCCTGACTTAGATGAGGAAGCCAAGCAGAAGGCTGTGATGGATGCCGTGCACGCACACTTCAAGCCGGAATTCATCA ACCGCCTTGACGAGCTGGTCATCTTCCACCCGTTGACTCGTCAGGAGCTCGGCAGCATCGTCGATTTGCAGGTGCGTCAG GTGGCCGCGCGGCTTACCGAACGCCGGATTTCGCTGCAGGTCACGGATGCGGCTCGCGATTGGCTCGCCAACACCGGGTA CGATCCGGCGTACGGTGCTCGTCCGCTACGCAGGCTCGTCCAGACCGAGGTTGGCGATCAGCTGGCGCGTCTGCTGCTTG CCGGCAAGGTGCATGACGGTGACACGGTGCTTGTTGACCAGACCGGTGGCGAACACCTCGAACTCACTGACATGCCTGAG GATCCGCTGTCCGGCGTGACCGTCGAAGGTGTGCAGGAAGACAAGTGA Protein sequence : MQAQFTNMAQEVISDAVQSASAAGNAQVETLHVLDALLRQQNGVVPSLIKAAGGDIKAIGTAVRNGLVNLPSASGSSTTQ AQPSRQLEAVLVQAEQEMKQLGDEFISTEHLLIAIAASKPNKSADILEANGVTAESLRKALPQIRGGAHVTSADAEGNYK ALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPSTLRNKKLIS LDLGSMVAGSKYRGEFEERLKAVLNEIKNANGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY RENIERDPALERRFQQVFVGEPSVEDTIAILRGIAPKYEAHHKVTIGDDALVAAAQLSNRYISGRQLPDKAIDLVDEAAA HLRMELDSSPEEIDELKRQVDRLKMERAYLLGNPKNEKAEQKKADALDEKSRERLADLDKELADKTEKLNGLNARWNMEK SGHNKVGDLRKKLDELQVEAERCERDGDYAKASEIRYGEIPHIQKEIAAAEQEERDAKETGAEEAPMVPDKVDADSIAQI VSEWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKDAIRAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALA DFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDLLLQVLDDGRL TDGQGRTVDFKNTILIMTSNLGSQFLVQPDLDEEAKQKAVMDAVHAHFKPEFINRLDELVIFHPLTRQELGSIVDLQVRQ VAARLTERRISLQVTDAARDWLANTGYDPAYGARPLRRLVQTEVGDQLARLLLAGKVHDGDTVLVDQTGGEHLELTDMPE DPLSGVTVEGVQEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-107 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-106 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-106 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D805_1594 | YP_007594301.1 | chaperone clpB | VFG2084 | Protein | 3e-109 | 43 |
| D805_1594 | YP_007594301.1 | chaperone clpB | VFG2076 | Protein | 2e-118 | 41 |
