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Name : lysS (D805_1369) Accession : YP_007594076.1 Strain : Bifidobacterium thermophilum RBL67 Genome accession: NC_020546 Putative virulence/resistance : Unknown Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1690825 - 1692522 bp Length : 1698 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACGAACCCTGAACAATCCGCGGAAGACGCCGCGGAACAGCATACCCAGCATACTGAAGACGCGCCGGTCATGACGAC CGTCGAACATGCAGAACTTCTGCTGGAGCAAGACAAGAAGATCCGCTCCAATATCGATGAAGGCAAGAGCCTTGACGAGG CGATCGACCCGAGTAACAAGGAATTCGGCCCGCTCGCACACCCCGAGCAGGTGCAGATGCGTGTCGCCAAGCGCGCGCTC ATGCTCAAGGAAGGTGTGCAGCCGTACCCGGTCCATGTCGATGTGACCGCTACCATCGGCGAGGTACGTGCCAAGTACGA TGGCAAGCTCAATGCCGGTGACGAGACGCAGGACGTCGTCGGCATCGCCGGTCGCGTGCTCTTCCTGCGCAACGGCGGCG GCCTGTGCTTCGTCAAGCTCGCCCAAGGCGACGGCACCGCCATCCAAGGTATGATCTCCAAGAAGGAGATCGGCGCGGAT TCCTTGAAGCAGTTCAAGCAGATGGTCGATTTGGGCGACCACCTGTTCCTCAAGGGCCGCGTCATCGCTTCGAAGACCGG CGAACTGTCCGTCTTCGCCAGCGAATGGCGTATCGCGGCGAAGGCCCTGCAGCCGTTGCCCGCGCTGCATAAGGAGCTGA GCGACGACACGCGCACCCGCAAGCCGTACATCGGCATGATCGCCGACGAACGCATTCGCGATATGGTGCGTAAGCGTTCC GCCGTGGTCTCCTCGCTGCGCCACACCTTCGAAGGGCATGACTTCCTCGAGGTAGAAACGCCAATGCTGCAGACCGTGCA CGGCGGCGCCGCGGCACGCCCGTTCACCACGCATATGAACGCCTTCGATATCGACCTGTATCTGCGCATCGCCCCGGAAC TGTTCCTCAAGCGCTGCCTCGTGGGCGGTATCGACCGTGTGTTCGAAATCAACCGCGATTTCCGTAACGAAGGTGTCGAC GCCACGCACGCCCCCGAGTTCACCATGCTCGAGGCCTATCAGGCATACGGCAATTACGACACGATCGCTGCGCTGGTCAA GGAACTCATCGTCAAGTCCGCGCTTGACGCCTTCGGCAGCACGAAGGTCACGCTGCTCAACGGTGAGGAATACGATTTCG GCGGCGAATGGAAGACCATCAGCATGTACGATTCGCTCTCCGAGGCGCTGGGTGAGGAAATCATCCCGAACGGCGGACCG GACAACCCGGGCACGTCGGTCGAACACCTGGGCGAGATCGCCGACAAGCTCGGTGTGGAACGCGACGACGTGGAGAACCA CGGCAAGCTGGTCGAGCACCTGTGGGAGCACTTCTACGAGGACAAGCTGTACGAGCCGACCTTCGTGCGCGACTTCCCGG TGGAGACCAGCCCGCTGGTCAAGTCCCACCGTTCAAAGCCCGGCGTGGTGGAGAAGTGGGATCTGTACGTGCGTGGCTTC GAGCTGGCGACCGGCTACTCCGAGCTCAACGATCCCGTGGTCCAGCGCGAACGGTTCGTCGCCCAGGCCAAAGACGCGCT CGCCGGCGATGTCGAGGCCATGGATATCGACGAGGACTTCCTTGAGGCGCTCGGCGTGGGTATGCCGCCGGCAGGCGGTA CCGGTATGGGCATCGACCGTCTGCTCATCGCGCTGACCGGCGCGACCATCCGCGAAACGATCACCTTCCCGCTGACCAAA CCGCTGAACCTTCAGTAA Protein sequence : MTNPEQSAEDAAEQHTQHTEDAPVMTTVEHAELLLEQDKKIRSNIDEGKSLDEAIDPSNKEFGPLAHPEQVQMRVAKRAL MLKEGVQPYPVHVDVTATIGEVRAKYDGKLNAGDETQDVVGIAGRVLFLRNGGGLCFVKLAQGDGTAIQGMISKKEIGAD SLKQFKQMVDLGDHLFLKGRVIASKTGELSVFASEWRIAAKALQPLPALHKELSDDTRTRKPYIGMIADERIRDMVRKRS AVVSSLRHTFEGHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEGVD ATHAPEFTMLEAYQAYGNYDTIAALVKELIVKSALDAFGSTKVTLLNGEEYDFGGEWKTISMYDSLSEALGEEIIPNGGP DNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKSHRSKPGVVEKWDLYVRGF ELATGYSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFLEALGVGMPPAGGTGMGIDRLLIALTGATIRETITFPLTK PLNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-143 | 57 |
