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Name : D805_1123 (D805_1123) Accession : YP_007593830.1 Strain : Bifidobacterium thermophilum RBL67 Genome accession: NC_020546 Putative virulence/resistance : Virulence Product : genetic competence regulator ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 1391363 - 1393969 bp Length : 2607 bp Strand : - Note : 'COG0542 ATPases with chaperone activity, ATP-binding subunit' DNA sequence : ATGTTCGAACGGTTTACAGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCTCGCTCCCTGCAGCACAACTA CATCGGCACCGAACATCTGCTGCTCGGCCTGATTCGCGAGGGCGAGGGCGTCGCCGCAAAGGCGCTCGCCTCCAAGGGCG TGAATCTGCAGGACACACGCAAGCAGGTTGAGGAGATGATCGGCAAGGGCAATGCGTCGCCCAACGGCCACATCCCATTC ACCCCACACGCCAAGCAGGTGCTCGAACTGAGCCTGCGCGAGGCGCTGCAGCTGGGGCACAGCTATATCGGCACGGAGCA CATCCTGCTCGGCCTGATTCGCGAGGGCGAGGGCGTCGGCACGCAGGTGCTCATCAAGATGGATGTCGATTTGGGTGAGC TGCGCAGTACGGTCATCGATATGATCCGCGGCAATTCAACCGGCCCGGATACCGACAACAAGGGCGAACTGGCGAATGCC GGCGGCGTTCAGGACAAGCGTGGGCAGACCGGCTCAGCGATTCTCGACCAGTTCGGCCGCAACCTGACCGCCGAAGCCGC GGAAGGCAAGCTTGACCCGGTGATTGGCCGTTCCGCGGAAATCGAACGTGTCATGGTCGTGCTGTCCCGCCGCACCAAAA ACAATCCGGTGCTCATCGGCGAGCCGGGCGTCGGCAAGACCGCCGTCGTCGAGGGGCTTGCGCAGAAGATCGTCGCGGGC GATGTGCCTGAAACGCTTAAGGACAAGCAGGTTTATTCCCTTGATCTGGGCTCCATGGTGGCCGGTTCGCGCTATCGCGG CGATTTCGAAGAGCGCCTGAAGAAAGTACTCAAGGAAATCAAGACCCGCGGGGATATCGTCCTGTTCATCGACGAAATCC ACACGATTGTCGGCGCCGGCAGCGCGGACGGTGCTCTGGGCGCGTCCGACATGCTTAAGCCGATGCTTGCACGCGGCGAA CTACAGACCATTGGCGCGACCACGACCGAGGAATACCGCAAGTACATCGAAAAGGACGCGGCGCTGGAACGCCGTTTCCA GCCGATTCAGGTCCATGAGCCGTCGATTGCCGAGACAATCGAGATTCTCAAGGGTCTGCGTTCGCGGTATGAGAACCATC ATCACGTGACCATCACCGATGGCGCGTTGCAGGCCGCCGCCGAGCTGTCCGCACGCTACATCCAGGACCGTCACCTGCCG GACAAGGCGATCGATCTGATCGACGAGGCCGGTGCGCGGCTGCGGATCAAGCGTCTGACGGCCCCACCCGAGCTCAAGGA TCTTGACGCGCAGGTCGCCAAGGTGTCTGCCGAGAAGGACGAAGCCATCAAGAAGCAGGACTTCGAGAAGGCCGCAGAAC TGCGTGACAGCCAGGAGAAGCTGGAAGCCGAGCGCAAAGAGAAGGAATCCTCGTGGCGCGAAGGCGAATCCAACGTGAAG ATGGAAGTGAACGAGGAGGTCATCGCCCAGGTCGTGGCCAGCACGACGGGTATCCCGGTCTTCAAGCTCACCCAGGCGGA ATCCAAGAAGCTGCTCAACATGGAAGCCGAGTTGCACAAGCGCATCATCGGCCAGGACGAAGCGGTTTCCGCGCTCGCCC GGTCCATCAGACGTACGCGTGTCGGTCTGAAGGATCCTAAGCGTCCGGCAGGTTCCTTCATCTTCGCCGGCCCCACCGGT GTCGGCAAGACGGAGCTCGCCAAGACCTTGGCGCAGTTCCTGTTCGATGACGAGGACGCGTTGATCCGCGTCGACATGTC CGAGTTCTCCGAGAAGTACGCCGCATCCCGTCTGTTCGGCGCGCCTCCGGGGTATGTCGGGTACGAGGAGGGCGGCGAGC TCACCGAGAAGGTGCGCCGCAAGCCGTTCTCCGTCGTGCTGTTCGACGAGATCGAGAAGGCCCATCCCGACATCTTCAAC ACCCTGCTTCAGGTACTTGACGATGGTCATCTGACCGATGGCCAGGGTCGCAAGGTGGACTTCAAGAACACGATCATCAT CCTGACCACCAACCTGGGCACACGCAATATCGCCAAAGCAGCGAACACGGGCTTCAACCTCGGTTCGGACACCGAGACGA GCTACGACCGCATGAAGGAGCAGGTGTACAGCGAACTCAAGGAACAGTTCCGTCCCGAGTTCCTCAACCGCCTTGATGAC ATCATCGTGTTCCGTCAGCTCACCGAGCCGCAGGTGCGTCAGATCGTCGATCTGGACGTCAAACAGCTCAACGACCGTCT GTTTGACCGTCATATGTCGCTCGAACTGACCGACAAGGCCAAGGACCTGCTTGCTGAGAAGGGCTTCGACCCGCTGCTCG GCGCACGTCCGCTGCGCCGTGTGATCCAGCGCGACATTGAGGACGCCATTTCGGAGAAGATCCTCATGGGTGAGTTGCAC GACGGCCAGCGTGTGGTCGTGGACGGCGAGGGCGAAGGCATTCTCGGCGATTTCACCTTCACCGGAGAGGAATTCTCTGA AGGTGACGACGCCGGCAATCCGGATGCGAAGCTGGTCGGCGCCACGTCGGCACCGGCAACGGATGCGTCAGCACAATCCG GCGATACCGGAGCTGAAGGCAACGGAGACATGCCGTCGTTGTCGTAA Protein sequence : MFERFTDRARRVIVLAQEEARSLQHNYIGTEHLLLGLIREGEGVAAKALASKGVNLQDTRKQVEEMIGKGNASPNGHIPF TPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSTVIDMIRGNSTGPDTDNKGELANA GGVQDKRGQTGSAILDQFGRNLTAEAAEGKLDPVIGRSAEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAG DVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE LQTIGATTTEEYRKYIEKDAALERRFQPIQVHEPSIAETIEILKGLRSRYENHHHVTITDGALQAAAELSARYIQDRHLP DKAIDLIDEAGARLRIKRLTAPPELKDLDAQVAKVSAEKDEAIKKQDFEKAAELRDSQEKLEAERKEKESSWREGESNVK MEVNEEVIAQVVASTTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALARSIRRTRVGLKDPKRPAGSFIFAGPTG VGKTELAKTLAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFN TLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRNIAKAANTGFNLGSDTETSYDRMKEQVYSELKEQFRPEFLNRLDD IIVFRQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEKILMGELH DGQRVVVDGEGEGILGDFTFTGEEFSEGDDAGNPDAKLVGATSAPATDASAQSGDTGAEGNGDMPSLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D805_1123 | YP_007593830.1 | genetic competence regulator ClpC | VFG0079 | Protein | 0.0 | 57 |
| D805_1123 | YP_007593830.1 | genetic competence regulator ClpC | VFG0080 | Protein | 2e-142 | 49 |
