Gene Information

Name : R2APBS1_0879 (R2APBS1_0879)
Accession : YP_007589277.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Resistance
Product : putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 982296 - 982997 bp
Length : 702 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGTGATTCTTCCCGGCCGCTTCTTGAAGCCCGCGATGTTAGCAAGTCGGTCAACGGTCCCGAGGGGAGGCTGGAAAT
CCTCAGCCAGGTCAGCCTGCAGGTGCAGCCGGGCGAGAGCTTCGCCATCGTCGGCGCCTCCGGTTCCGGCAAGACCACCC
TGCTCGGCCTGCTGGCCGGGCTGGACACGCCGGACGGCGGCAGCATCGCGCTGGACGGCCATGCGTTGCAGCAGTTGGAC
GAGGAGGCCCGCGCCGACCTGCGCCGGCGCCTGGTCGGCTTCGTGTTCCAGTCGTTCCACCTGCTGCCCGCGCTCACCGC
CGAGGAGAACGTGATGCTGCCGCTGGAACTGGAGGGCAGCAGCGATGCGCGCCAGCGCGCCCGCGCCGCGCTCGACGCGG
TGGGCCTGGGCGCGCGGCGGCGGCATTATCCGGCCCAGTTGTCCGGCGGCGAGCAGCAGCGCGTGGCGATCGCCCGTGCG
TTCGTGCACCGCCCGCGCGTGCTGTTCGCCGACGAACCCACCGGCAACCTCGACCAGCGCACCGGCCACCACGTCTGCGA
CCTGCTGTTCGCACTGAACCGCGACCACCACACCACCCTGGTGCTGGTCACCCACGACGCGGCCCTGGCCGCGCGTTGCG
ACCGCCGGATCGAGCTGGAGGAAGGCCGCGTCGTCTCGACCGGCACGGACGTGCCGGCATGA

Protein sequence : 
MSDSSRPLLEARDVSKSVNGPEGRLEILSQVSLQVQPGESFAIVGASGSGKTTLLGLLAGLDTPDGGSIALDGHALQQLD
EEARADLRRRLVGFVFQSFHLLPALTAEENVMLPLELEGSSDARQRARAALDAVGLGARRRHYPAQLSGGEQQRVAIARA
FVHRPRVLFADEPTGNLDQRTGHHVCDLLFALNRDHHTTLVLVTHDAALAARCDRRIELEEGRVVSTGTDVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-24 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-25 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_0879 YP_007589277.1 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component NC_008702.1.4606598. Protein 3e-30 50
R2APBS1_0879 YP_007589277.1 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component NC_012469.1.7686878. Protein 4e-28 42