Gene Information

Name : R2APBS1_0806 (R2APBS1_0806)
Accession : YP_007589206.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 901134 - 901850 bp
Length : 717 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGCTGAAGATGACCCACCTGTCCAAGGTCTACCGCACCGAAGTGGTGGAGACCTATGCGCTGCGCGATTTCAACATCGA
TGTGAAGGAAGGCGAGTTCGTCGCCGTCACCGGCCCGTCCGGCTCCGGCAAGACCACCTTCCTGACCATCGCCGGCTTGC
TGGAAACTTTCTCGGGCGGCGAGTACCACCTGGACGGCATCGAGGTGAGCAACCTCAACGACAACGCCCGCTCGAAGATC
CGCAACGAGAAGATCGGCTTCATCTTCCAGGCGTTCAACCTGATCCCCGACCTCAACGTGTTCGACAACATCGAGGTGCC
GCTGCGCTACCGCGGCATGAAGGCGGCCGAGCGCAAGCAGCGCATCATGGACTCGCTGGAGCGCGTCGGCCTGGCCTCGC
GCGCCAAGCACTACCCGGCCGAACTCTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCCGGCTCGCCG
CGCCTGCTGCTGGCGGACGAACCGACCGGCAACCTGGACACCCAGATGGCGCGCGGCGTGATGGAGCTGCTGGAGGACAT
CCACCGCGAAGGCGCCACCATCGTGATGGTCACGCACGACCCGGAGCTGGCTGCGCGCGCCCAGCGCAACGTGCACATCA
TCGACGGCCAGGTGGTCGACCTGTCCGAGGATCCGCGCTTCCACACCGTGCATGCCGCCGAAGAAGCCCATGGCTGA

Protein sequence :
MLKMTHLSKVYRTEVVETYALRDFNIDVKEGEFVAVTGPSGSGKTTFLTIAGLLETFSGGEYHLDGIEVSNLNDNARSKI
RNEKIGFIFQAFNLIPDLNVFDNIEVPLRYRGMKAAERKQRIMDSLERVGLASRAKHYPAELSGGQQQRVAIARALAGSP
RLLLADEPTGNLDTQMARGVMELLEDIHREGATIVMVTHDPELAARAQRNVHIIDGQVVDLSEDPRFHTVHAAEEAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_0806 YP_007589206.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-51 48
R2APBS1_0806 YP_007589206.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 8e-44 46
R2APBS1_0806 YP_007589206.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-35 44
R2APBS1_0806 YP_007589206.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 6e-32 42