Gene Information

Name : R2APBS1_0748 (R2APBS1_0748)
Accession : YP_007589150.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 836376 - 837293 bp
Length : 918 bp
Strand : +
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence : 
ATGAAGAAGGAAGAGAGCCGCGCCAGTATCGCCGAAGCCGACCAGCGCAGCATCGCCGCGTTCGTGGAGCGGGTGTGGTC
GGAGGACGGCCTGGCCGACCGCACGCTGGAGGCCTACCGGCGTGACCTGGCCGCACTGGCCGGCTGGCTCGCCGCACGCG
GGCGCGACCTGCGCAGCGCGCGGCGCGAGGACATTTCCGCCTACCACGGCGCGCAGCCGGCAGCGGTGCGCTCGATCGCG
CGGCGGCAGTCGGCATTCCGCCGCTACTACGCGTTCCTCGCCCGCAGCGAGCCGGGCTTCGCCGATCCCACCCTGTTGAT
CGAGCGTCCGAAGCTGCCGCGCAGCCTGCCCAAGGCACTGGCCGAACGCGAGATCGAGGGCCTGCTCGGCGCGCCCGACA
CCGGCACCACGCTGGGCCTGCGCGATCGCGCGATGCTGGAGCTGATGTACGCCTCCGGCCTGCGCGTGTCCGAGCTGGTG
GAGCTGCCGCTGGCCGCGCTGAACCCGCGCCAGGGCGTGCTGCGGGTCACCGGCAAGGGCGGCAAGGACCGGCTGGTGCC
GGTCGGCGAGGAAGCGCTGGCGCGCATCGGCACCTATCTGATCGAGGCGCGGCCGGCGCTGGCGAAAGGCCGCCAGCCGC
CGGCGCTGTTCCTCAGCCAGCGCGGCGAAGGCATGACCCGGCAGATGTTCTGGACCCTGGTGAAGCGCTACGCGCTGAAG
GTCGGCATCAACCCGAAACGCATCTCGCCGCACGTGCTGCGCCACTCCTTCGCCACCCACCTGCTGAACCACGGCGCCGA
CCTGCGCGCGCTGCAGATGCTGCTCGGCCACAGCTCGCTCAGCACCACGCAGATCTACACCCTGGTGGCGAAGGAAGGCC
TGAAGCGGCTGCATGCGCAGCACCATCCGCGGGGGTGA

Protein sequence : 
MKKEESRASIAEADQRSIAAFVERVWSEDGLADRTLEAYRRDLAALAGWLAARGRDLRSARREDISAYHGAQPAAVRSIA
RRQSAFRRYYAFLARSEPGFADPTLLIERPKLPRSLPKALAEREIEGLLGAPDTGTTLGLRDRAMLELMYASGLRVSELV
ELPLAALNPRQGVLRVTGKGGKDRLVPVGEEALARIGTYLIEARPALAKGRQPPALFLSQRGEGMTRQMFWTLVKRYALK
VGINPKRISPHVLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVAKEGLKRLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-57 56
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-57 56