Gene Information

Name : R2APBS1_0633 (R2APBS1_0633)
Accession : YP_007589036.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Unknown
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.48
Position : 700612 - 701799 bp
Length : 1188 bp
Strand : +
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine (thiol)-lyase

DNA sequence :
ATGACCGAGCCCGCCCCCTGTACCCGCGCCGTGCGCGCCGGGATCGAGAGCGACACCCAGCACGGCGCCGTGGTGCCCGC
GCTGCACCTGTCGACCAACTACAGCTTCGCCGGCTTCGGCCGCAAGCGCGCGTACGACTACTCGCGCAGCGGCAACCCGA
CCCGCGACCTGCTCGGCGACGCACTGGCGGAACTGGAGCAGGGCGCCGGCGCGGTGGTGACCTCCAGCGGCATGTCGGCG
GTAGCGCTGGCGCTGGAACTGGTGCCGGCCGGGGCCACCGTGCTGGCCGCGCACGACTGCTACGGCGGCACCTGGCGGCT
GCTCGATGCGTGGGCGAAGAAGGGCCGCTTCCAGGTCGAGTTCGCCGACCTCACCGACAGCGTGGCGCTGGCTGCCGGCC
TGGCGCGCAAGCCGGCGCTGGTGTGGGTGGAGACGCCGTCGAACCCGCTGCTGCGGATCACCGACATCCGCCATGTGGCG
CAGGCCGCGCACGCGGTGGGCGCCTTGATGGTGGTCGACAACACCTTCCTGTCGCCGGCGCTGCAGCAGCCGTTGCTGCT
CGGCGCCGACGTGGTGGTGCACTCCACCACCAAGTACATCAACGGCCACAGCGACGTGGTCGGCGGCGCGGCGGTGGCGC
GCGACGCGGCGGTAGCCGAGCAGCTGAAGTGGTGGGCCAACTGCAACGGCCTCACCGGCGCGCCGTTCGACAGCTACCTC
ACCCTGCGCGGCCTGCGCACGCTTGGCGTGCGCTTGCGCCAGCACCAGGAGAACGCTGCGCGCATCGCCGAACAGCTGGA
CGCGCACGCGGCCGTGCGCAAGGTGTATTACCCCGGCCTGGCCGCCCACCCCGGGCATGCGCTGGCGGCGCGCCAGCAAC
AGGGTTTCGGCGCCATGCTGAGCTTCGAACTGGACGGCGACGTGGCGCAGATCGAGGCGTTCGTCGACGGCCTCGAATAC
TTCTCGCTGGCCGAATCGCTGGGCGGGGTGGAAAGCCTGATCGCACACCCGGCCAGCATGACCCACGCGTCGATGGCGCC
GGAGGCGCGCCGCACCGCCGGCATCGCCGACAGCCTGCTGCGCCTGTCGGTGGGCATCGAGGATGGCGACGACCTGCTGC
GCGACCTCGACGCGGCGCTGGTCCGAGCAGTAGCTGTACAGACGTCCAAACGCCGGGTGCTCGCATGA

Protein sequence :
MTEPAPCTRAVRAGIESDTQHGAVVPALHLSTNYSFAGFGRKRAYDYSRSGNPTRDLLGDALAELEQGAGAVVTSSGMSA
VALALELVPAGATVLAAHDCYGGTWRLLDAWAKKGRFQVEFADLTDSVALAAGLARKPALVWVETPSNPLLRITDIRHVA
QAAHAVGALMVVDNTFLSPALQQPLLLGADVVVHSTTKYINGHSDVVGGAAVARDAAVAEQLKWWANCNGLTGAPFDSYL
TLRGLRTLGVRLRQHQENAARIAEQLDAHAAVRKVYYPGLAAHPGHALAARQQQGFGAMLSFELDGDVAQIEAFVDGLEY
FSLAESLGGVESLIAHPASMTHASMAPEARRTAGIADSLLRLSVGIEDGDDLLRDLDAALVRAVAVQTSKRRVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-36 43