Gene Information

Name : R2APBS1_0575 (R2APBS1_0575)
Accession : YP_007588979.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.1
Position : 630960 - 632126 bp
Length : 1167 bp
Strand : +
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGCCCAAGAAGATGCCTGCCGCCCACCACGGACTCGGAACGCGCGCGATCCACGCCGGCCAGCATCCCGATCCGTCCAC
CGGCGCCATCATGACGCCGATCTACGCCACCTCGACCTACGTGCAGGAGAGCCCTGGCAAGCACAAGGGCTACGAGTATT
CGCGCACGCAAAATCCTACGCGCATGGCCTACGAACGCTGCGTGGCGGACCTGGAAGGCGGCGTGGCCGGTTTCGCGTTC
GCCTCCGGCCTGGCTGCCGCGGCGACCGTGCTGGACCTGCTCGACTCGGGCAGCCACATGATCGCGATGGATGACCTGTA
CGGCGGCACCTACCGCCTGTTCGAGAGGGTGCGCCGGCGCTCGGCCGGGCTCGACTTCAGCTTTATCGACCTGAACGACA
TGGCGGCGCTGAAGGCGGCACTGAAGCCGAACACGCGGATGATCTGGGCGGAGACGCCGACCAACCCGATGCTGAAGCTG
GTCGACCTGGCCAAGGTCGCCGCGTTCGCGAAGAAGCACGGCCTGATCCTGGTGGTCGACAACACCTTCTGCTCGCCGAT
GGTGCAGCGACCGCTGGAATACGGCGCGGACCTGGTGCTGCATTCGGCCACCAAGTACATCAACGGCCATTCCGACATGG
TCGGCGGCATCGTGGTCGCCAACGATCAGGAACTGGCCGGACAGATGGCTTTCCTGCAGAACTCGGTCGGCGCGGTGGCC
GGCCCGTTCGATGCCTTCCTCGCCATGCGCGGCCTGAAGACCCTGCACCTGCGCATGCGCCAGCACTGCGCCAGCGCGCT
GGAGCTGGCCACGTGGCTGCAGAAGCACCCGGCGGTCGAGCGGGTGATCTACCCCGGCCTGAAGAGCCACCCGCAGCACG
CACTGGCCAAGCGTCAGATGCACGGCTTCGGAGGCATTGTCACCATCGAGGTGAAGGGCGGCCTGAAGAAGGCCAAGCGC
ATGCTGGAACGCTGCGAGCTATTCGCGTTGGCCGAATCGCTCGGCGGTGTCGAGAGCCTGATCGAGCATCCGGCGATCAT
GACCCACGCCTCGGTGCCCGCGGCCAACCGCAAGCGGCTGGGGATCAGCGATGGGCTGGTGCGGCTGTCAGTGGGGGTAG
AAGATGTCAGCGATTTGCGCAATGAGTTGGGACATGTACTTGGCTGA

Protein sequence :
MPKKMPAAHHGLGTRAIHAGQHPDPSTGAIMTPIYATSTYVQESPGKHKGYEYSRTQNPTRMAYERCVADLEGGVAGFAF
ASGLAAAATVLDLLDSGSHMIAMDDLYGGTYRLFERVRRRSAGLDFSFIDLNDMAALKAALKPNTRMIWAETPTNPMLKL
VDLAKVAAFAKKHGLILVVDNTFCSPMVQRPLEYGADLVLHSATKYINGHSDMVGGIVVANDQELAGQMAFLQNSVGAVA
GPFDAFLAMRGLKTLHLRMRQHCASALELATWLQKHPAVERVIYPGLKSHPQHALAKRQMHGFGGIVTIEVKGGLKKAKR
MLERCELFALAESLGGVESLIEHPAIMTHASVPAANRKRLGISDGLVRLSVGVEDVSDLRNELGHVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-74 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-75 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_0575 YP_007588979.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 3e-62 45