Gene Information

Name : R2APBS1_3913 (R2APBS1_3913)
Accession : YP_007592198.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 4176381 - 4177298 bp
Length : 918 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence :
ATGAACCCTGCCACCCTGCGTATCGCCACCCGCAAGAGCGCGCTCGCGCTGTGGCAGGCCGAACATGTCGCCACGCTGCT
GCGCACGACGCACCCGGGGCTGACGGTGGAACTGGTGCCGATGAGCACGCGCGGCGACGAGATCCTCGACCAGCCGCTGG
CCACGATCGGCGGCAAGGGGCTGTTCCTGAAGGAACTCGAGGTGGCGATGCTGGAAGGCCGCGCCGACCTCGCCGTGCAT
TCGCTGAAGGACGTGCCGGCGCAGCTGGAGCCGGGCTTCGCGCTGCCGGCGATCCTGCCGCGCGCGGACGCCGCCGACGC
GTTCGTCAGCAACCATTACGACGACCTGGCCGCGCTGCCCCATGGCGCGCGCGTGGGCACCTCGTCGCTGCGCCGGCAGG
CGCAGTTGCGCGCGTTGCGGCCGGATCTCGTCTTGCTCGACCTGCGCGGCAACGTCGGCACCCGGCTGGGCAAGCTCGAC
GCCGGCGCCTACGACGCGATCGTGCTGGCCTGCGCCGGGCTGGAGCGCCTCGACCTGGCCGCGCGCATCCGCTCGCGACT
GGCCGCGCCGGACTGGCTGCCGGCGCCGGGCCAGGCGGCGATCGCGATCGAGGCGCGCGAAGGCCAGCCCGGCGTGCTGG
CCTTGCTGGCCGCGCTGGACGATGCCGACACCCGGCTCACGGTGAGCGCCGAGCGCGCGATGAACCAGGCGCTGGGCGGC
AGCTGCACGGTGCCGGTCGGTGCCTGGTGCATGCTGGGCGAACACGGCCTGCACCTGCGCGGCCTGGTCGGCGACGCGGC
CGGCGGCCGGTTGCTGCGCGCCGAAGCCAGCGGCCCCAGCAACCAGGCGATCGCACTGGGCCGGCAGGTGGCGGCCGAGC
TGCTGGCGCAGGGCGCGGCGGAGTTTCTCGGGCTCTGA

Protein sequence :
MNPATLRIATRKSALALWQAEHVATLLRTTHPGLTVELVPMSTRGDEILDQPLATIGGKGLFLKELEVAMLEGRADLAVH
SLKDVPAQLEPGFALPAILPRADAADAFVSNHYDDLAALPHGARVGTSSLRRQAQLRALRPDLVLLDLRGNVGTRLGKLD
AGAYDAIVLACAGLERLDLAARIRSRLAAPDWLPAPGQAAIAIEAREGQPGVLALLAALDDADTRLTVSAERAMNQALGG
SCTVPVGAWCMLGEHGLHLRGLVGDAAGGRLLRAEASGPSNQAIALGRQVAAELLAQGAAEFLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-65 56
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-65 56