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Name : R2APBS1_3911 (R2APBS1_3911) Accession : YP_007592196.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 4173390 - 4175438 bp Length : 2049 bp Strand : + Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : ATGTCCCACACCCTCGACCAGCAATGCATCGACCTGCTGCGTTTCCTGTCGGTGGACATGGTGCAGAAGGCCAACAGCGG CCATCCCGGCCTGCCGCTGGGCGCCGCGCCGATGGCCTACGCGCTGTGGACGCGGCAGCTGAAGCACAACCCCGCCAATC CGCACTGGTCCGACCGCGACCGCTTCGTGCTGTCCGCCGGCCACGGCTCGGCGCTGCTGTACAGCCTGCTGTTCGCCACC GGCTACGACCTCACGCTGGACGACCTCAAGCAGTTCCGCCAGTGGGGCAGCAAGGCGCCCGGGCATCCCGAGTACGGCCA CACGCCGGGCGTCGAGATCACCACCGGCCCGCTCGGCCAGGGCCTGGCCAACGCGGTGGGCATGGCGATCGGCGAGGCGC ACCTGGCCGCGCGCTACAACCGCGACGGCCATCGCGTGATCGACCATCGCACCTGGGCCATCGTCAGCGACGGCGACCTG ATGGAAGGCGTGGCCAGCGAGGCCGCCTCGCTGGCCGGGCACCTGAAGCTGGGCAAGCTGGTCTGCCTGTACGACGACAA CGACGTGACGCTGGCCGGCGGCACCGACATCACCTTCTCCGAGGATCGCGCGAAACGCTTCGAAGCCTACGGCTGGCAGA CCATCCACGTGGCCGACGGCAACGACCTGGCGGCGATCGACGCCGCGCTGCTTGAAGCGCGCGCCGACACCACGCGGCCC TCGCTGATCCTGCTGCGCACGCATATCGGCTACGGCTCGCCCGAGCAGGACACGTTCAAGGCGCACGGCTCGCCGCTGGG CGTCGAGGACGTCAGGAAGACGAAGGAGAAGCTGGGCTGGCCGGTCGAACCGGACTTCCTGCTGCCGCCGCCGGCGCTGG CGCATTTGCGCGAGGCATTGGATCGCGGCGTGGCAGTCGAGCGCGCCTGGAACAGCCGTATGGACGTCTATGCCAAAGCC TTCCCCGAGCTGGCCGCCGAGTTGCAGGGCCGCCTGGACGGCGAACTGCCGCCGGGCTGGGACGCGGACATCCCGGTGTT CCCCACCGACGCCAAGGGCCTCGCCACTCGCGTCGCCGGCGGCAAGGTGATGAACGCGATCGCGCCGAGATTGCCCGCCC TGTTCGGCGGCTCGGCCGACCTCGATCCGTCCACCCACACCGCGCTGAAGGACCTGGGCGACTTCAATCCGCCGCTGGCG CCGGGCGAAGACAGCCAGGGTTCGGACGGCGGCGGCTGGAGCCACGCCGGGCGCAACCTGCACTTCGGCGTGCGCGAACA TGCGATGGGCGCGATCGCGAACGGGCTGGCCGTGCACGGCGGCTTCGTGCCGTACGGCTCGACCTTCCTGATCTTCTCCG ACTACATGCGCCCGGCGATCCGCCTGGCCGCGCTGATGGGCGTGCACGTGGTGCACGTGTTCACCCACGACAGCGTGGCG CTGGGCGAGGACGGCCCCACCCACCAGCCGATCGAACAGCTGGCCAGTCTGCGTGCAATCCCCAACCTCAGCGTGATCCG CCCCGCCGACGCGAACGAGACCACGGTGGCGTGGCGGGTGGCGCTGGAAACGAAGCGGCGACCGGTGCTGCTGGCGCTGA CCCGGCAGAACGTGCCCACGCTGGACCGCACCCGCTACGCCAGCGCCGACGGCCTGCGCCGGGGCGCGTACGTGCTCCGC GATGCGCCGGACGGCAAGCCCTCGCTGATCCTGATCGCCAGCGGCTCCGAAGTCGGCCTGATCGTCGAAGCCGCCGACCA GCTGCAGGCCGATGGCATCGCCGTGCGCTGCGTGTCGATGCCGAGCTGGGAGCTGTTCGATGCACAGCCGCAGGCGTATC GCGATCAGGTGTTACCGCCCGACGTACCGGCCCGGCTGGCGGTGGAGCTGGGCGTATCGCAAGGCTGGGACCGCTACACC GGCGCGCACGGCGACATGCTCGGCATCGACCACTTCGGCGCCTCCGCCCCGGCCGAAGTGCTGCTGCGCGAGTTCGGCTT CACGGTGGACAACGTGGTGGCACGGGCGAAGGCGCTGCTGGGCAAATAA Protein sequence : MSHTLDQQCIDLLRFLSVDMVQKANSGHPGLPLGAAPMAYALWTRQLKHNPANPHWSDRDRFVLSAGHGSALLYSLLFAT GYDLTLDDLKQFRQWGSKAPGHPEYGHTPGVEITTGPLGQGLANAVGMAIGEAHLAARYNRDGHRVIDHRTWAIVSDGDL MEGVASEAASLAGHLKLGKLVCLYDDNDVTLAGGTDITFSEDRAKRFEAYGWQTIHVADGNDLAAIDAALLEARADTTRP SLILLRTHIGYGSPEQDTFKAHGSPLGVEDVRKTKEKLGWPVEPDFLLPPPALAHLREALDRGVAVERAWNSRMDVYAKA FPELAAELQGRLDGELPPGWDADIPVFPTDAKGLATRVAGGKVMNAIAPRLPALFGGSADLDPSTHTALKDLGDFNPPLA PGEDSQGSDGGGWSHAGRNLHFGVREHAMGAIANGLAVHGGFVPYGSTFLIFSDYMRPAIRLAALMGVHVVHVFTHDSVA LGEDGPTHQPIEQLASLRAIPNLSVIRPADANETTVAWRVALETKRRPVLLALTRQNVPTLDRTRYASADGLRRGAYVLR DAPDGKPSLILIASGSEVGLIVEAADQLQADGIAVRCVSMPSWELFDAQPQAYRDQVLPPDVPARLAVELGVSQGWDRYT GAHGDMLGIDHFGASAPAEVLLREFGFTVDNVVARAKALLGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-151 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-145 | 50 |
