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Name : R2APBS1_3877 (R2APBS1_3877) Accession : YP_007592163.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Unknown Product : type I restriction-modification system methyltransferase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 4133853 - 4135463 bp Length : 1611 bp Strand : + Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain DNA sequence : TTGAATATCGAGTTGAGAAAGACCCTCTGGGCCGCCGCCGACAAGCTGCGCTCCAGCATGGACGCGGCCGAGTACAAGCA TTTGGTGCTTGGGCTGATCTTCGTGAAGTACATCTCCGATGCGTTCGACGAGTTGCGCAGCGGACTGCGCGTGGCGCTGG CTGATCCGGAATCCGAGTTGTACCTCGAAGATCCCGTGATGCGCGCCGCCGCGGAAGAGGATCGCGACTATTACACCGCC GCCAACGTGTTCTGGGTGCCCGAGCAGGCGCGCTGGGAAAACCTTCGCGCGCACGCCAAGCAGGCGAACATCGGCCGCCG CATCGACGCCGCACTGGACGCGATCGAGGCGGACAACCCGCGCCTGAAGGGCATCCTCGACAAGCGTTTCGGCCGCGCCC AGCTGGAACCGGGCAAGCTCGGCGAGCTGGTCGACCTAGTCTCCACGATCGGTTTCGGCGCGGGCGGCAAGGCCAAGGAC GTGCTTGGCGAGGTGTACGAATACTTCCTCGGCCAGTTCGCCAGCGCCGAAGGCAAGAAGGGCGGCCAGTTCTACACGCC CGCCTCGGTGGTCGAGGTGCTGGTGGAAATCCTCGGCCCGCACCAGGGCAAGGTGTATGACCCGTGCTGCGGTTCCGGCG GCATGTTCGTGCAGTCGGAGAAGTTCGTGGAGAGCCACGGCGGCCGCTTCGGCGACCTCAGCATCTACGGCCAGGAAGCG AACCCCACCACCTGGCGACTGGTGGCAATGAACCTCGCCATCCGCGGCATGGATTTCAACCTCGGCAAGGAGCCGGCCGA CACCTTCCACCGCGACCAACACCCCGACCTACGCGCCGACTACGTACTGGCCAACCCGCCGTTCAACATCAGCGACTGGG GCGGCGAGCGCCTTGCCGACGATCGCCGCTGGCAGTTCGGCACGCCGCCCGCCGGCAACGCCAACTACGCCTGGCTGCAG CACATCCTGCACCACCTGTCCGCGCGCGGGCAGGCCGGCGTGGTGCTGGCCAACGGCAGCATGAGCTCCAACCAGAACAG CGAAGGCGCGATCCGCCAGGCGATGGTCGAACGCGACGTGGTCGAGGTGATGGTGGCGCTGCCGCCGCAACTGTTCTTCA ACACCCAGATTCCCGCCTGCCTGTGGTTCCTGGCGAAAGACAAGACCAAGAACGGCCGCGACCGCCGCGGCGAAGTGCTG TTCATCGACGCCCGCAAACTCGGCCGCATGGAAGGCCGCGTGTTCCGCGTCTTCGACGACGAAGACATCGCCCGCATCGG CGACACCGTGCACCGCTGGCGTCAGGCTTTTCCCCCTCTCCCCCCGGCGACCGAAGGAAGTTCCCGTGGGAGAGAGGGCC GGGGTGAGGGTTTGGCCTACGCCGACGTCCCCGGCTTCTGCCGCAGCGTGCCCCTCGCCGAAATCGCCGAACACGGCTAC GTGCTCACCCCTGGCCGCTACGTGGGCGCGGAGGATATCGAGGACGACGACGAGGTGTTCAGCGAGAAGATGGAGCGGCT AACCGCGCAGCTCGCCGAGCAGATGGCGAAGGGTGTGGAGCTGGATGCGCTGATCCGGGAGAAGCTGGGGGCGTTGGGTT ATGGCGTCTGA Protein sequence : MNIELRKTLWAAADKLRSSMDAAEYKHLVLGLIFVKYISDAFDELRSGLRVALADPESELYLEDPVMRAAAEEDRDYYTA ANVFWVPEQARWENLRAHAKQANIGRRIDAALDAIEADNPRLKGILDKRFGRAQLEPGKLGELVDLVSTIGFGAGGKAKD VLGEVYEYFLGQFASAEGKKGGQFYTPASVVEVLVEILGPHQGKVYDPCCGSGGMFVQSEKFVESHGGRFGDLSIYGQEA NPTTWRLVAMNLAIRGMDFNLGKEPADTFHRDQHPDLRADYVLANPPFNISDWGGERLADDRRWQFGTPPAGNANYAWLQ HILHHLSARGQAGVVLANGSMSSNQNSEGAIRQAMVERDVVEVMVALPPQLFFNTQIPACLWFLAKDKTKNGRDRRGEVL FIDARKLGRMEGRVFRVFDDEDIARIGDTVHRWRQAFPPLPPATEGSSRGREGRGEGLAYADVPGFCRSVPLAEIAEHGY VLTPGRYVGAEDIEDDDEVFSEKMERLTAQLAEQMAKGVELDALIREKLGALGYGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 6e-142 | 53 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-142 | 53 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 6e-142 | 52 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 4e-128 | 50 |
