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Name : R2APBS1_3790 (R2APBS1_3790) Accession : YP_007592083.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Unknown Product : pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component Function : - COG functional category : - COG ID : - EC number : - Position : 4042141 - 4043496 bp Length : 1356 bp Strand : + Note : PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA sequence : GTGAGCCAACAAAGCTACGACCTCGTCGTCATCGGCAGCGGCACCGCCGCCAACGTCATCGCCTTCAATTGCCGCAAAGC CGGCTGGTCGGTGGCGATCATCGATCACCGGCCGTTCGGCGGTACTTGCGCGCTGCGCGGTTGCGACCCGAAGAAAATGC TGATCGCCGCCACCGAAGTGATCGACGGCTTTACGCGCATGGGCGCCATCGGCACCGTGCAAGGCGAGTTGCACATCGAC TGGGCTGCGCTACAGCGGCACAAGCGTTCGTTCACCGATCCGGTGCCGGGTCATCGCGAACAGGCCTACGCCAAACAGGG CATTGATGCGTATCACGGCCGCGCCCGTTTCAGTGGACGCAACACCATCACAGTGGGCGATCGGACGCTCCATGCCAAGC ACATCGCCATCGCTGCTGGCGCGGAACCGGTTTGGCTGCCGATCGAGGGCGCCGAGCACCTGGTCTTGAGCGATGACTTT CTGAATCTTGAATCGCTGCCCAGGCGCATCGTGCTGGTCGGCGGCGGCTACATCGGTTTCGAGTTTGCCCATATCGCCGC GCGCGCCGGCGCCGAAGTTTCGATCTTCAACCGGGGCGCGCAGCCGCTGGCCGGCTTCGATCCGGATCTGGTCGGCCTGC TGGTCGAACGCACCCGCGCGCTCGGCGTGGCGGTACATCTCGGCTATGAAGTGAAAGCGCTGTGCAAGCGCGGTGACGGT TTCGAAGTCGAGGCGCAAGGCCCGGACGGGCGTTTGGTCGTGGACGCCGACATGGTGATCCACAGTGGCGGGCGCGCGCC CGCACTGGAAGCACTGGATCTGGATGCGGCCGGTATCGCGCACGACCACGGCCGGCTGACGCTGGACAAGACCTTCCGCA GCACCTCCCATCCTGCGGTCTATGCCGCAGGCGATGCGTCCGGCGGGCCGTTGCCGCTGACCCCGGTGGCCGCACTGGAG GCCCACGCGGTGGTCGACAACCTCTTGCACGACAAGCACGTCACGGTCGACTACACCGGTATTCCCAGTGCCGTGTTCAC CCTGCCGGTGCTGGCCCGCGTCGGTCTGCTCGAAGCCGAAGCCAGGGCGCAGGGTCTGCGCTTCAAGCTCAGCCACGCCA ACGTGCCGGGCTGGTTCACTGCACGCCGTGTCAACGAATCATGCTACGGCTACAAGGTGTTGGTGGAGGAGGGCAGCGAT CGTATCCTTGGCGCCCATCTGATCGGTCCGGAGGCGGCCGAGGTGATCAACCTGTTCGGTTTCGCCATGCGCAGCGGACT CGGCGCCGCCGCGATCCGCCGCGCCACCTTTGCCTACCCCACCGCAGCGTCGGATATCGAATCCATGCTGCCGTAA Protein sequence : MSQQSYDLVVIGSGTAANVIAFNCRKAGWSVAIIDHRPFGGTCALRGCDPKKMLIAATEVIDGFTRMGAIGTVQGELHID WAALQRHKRSFTDPVPGHREQAYAKQGIDAYHGRARFSGRNTITVGDRTLHAKHIAIAAGAEPVWLPIEGAEHLVLSDDF LNLESLPRRIVLVGGGYIGFEFAHIAARAGAEVSIFNRGAQPLAGFDPDLVGLLVERTRALGVAVHLGYEVKALCKRGDG FEVEAQGPDGRLVVDADMVIHSGGRAPALEALDLDAAGIAHDHGRLTLDKTFRSTSHPAVYAAGDASGGPLPLTPVAALE AHAVVDNLLHDKHVTVDYTGIPSAVFTLPVLARVGLLEAEARAQGLRFKLSHANVPGWFTARRVNESCYGYKVLVEEGSD RILGAHLIGPEAAEVINLFGFAMRSGLGAAAIRRATFAYPTAASDIESMLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 7e-102 | 49 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 9e-102 | 49 |
