Gene Information

Name : R2APBS1_3525 (R2APBS1_3525)
Accession : YP_007591823.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Unknown
Product : glutamate synthase small subunit family protein, proteobacterial
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3737286 - 3738725 bp
Length : 1440 bp
Strand : -
Note : PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial

DNA sequence :
ATGAGCGACAAACTGTTCCAGTTCCTCAATCTCCCCCGCCAGCCACCCAAGGCGGTGCCGGTGGCGATCCGCGTGCTCGG
CTACGGCGAGATCAGCGGCGACTTCGCACCGGCTGCGGCGGTGGGCCAGGCCGAGCGCTGCCTCGACTGCGGCAACCCGT
ACTGCGAGCACGCCTGCCCGGTGCACAACTACATCCCGGGCTGGCTGAAGCTGGTGCAGGACGGGCGCCTGTTCGAGGCC
GCCACGCTGATGCACGAGACCAACCCGCTGCCGGAAATCTGCGGCCGCGTATGCCCGCACGATCGCCTGTGCGAAGGCGC
CTGCACGCTGGAGCAGGGCGGCTTCGGCGCGGTGACCATCGGCAGCATCGAGCGCTCGATCACCGACGAGGCGTTCCGCC
AGGGCTGGCGGCCGGACCTGTCCGGCGTGGTGGAAAGCGGCCGCCGCGTGGCGGTGGTCGGCGCCGGCCCGGCCGGGCTG
TCGTGCGCGGACCGGTTGCGCCGCGCCGGCATCGCGGTGGACGTGTTCGACCGCCAGCGCGAGATCGGCGGTCTGCTCAC
CTTCGGCATCCCGCCGTTCAAGCTGGACAAGACGGTGATCCACACCCGCCGCGCGGTGCTCGAAGGCATGGGCGTGCGTT
TCCACCTCAACGTGGAGATCGGCCGCGACCTCGCGTTCGAGCGGCTGCTGGCCGACTACGATGCGGTGTTCCTCGGCACC
GGCGCCTACACCTTCGTCGACGGCGAGCTGCCCGGGCGCGAGCTCGATGGCGTGCACGACGCGCTGCCGTTCCTGATCGC
CAACGCGAACCGCCTGCTCGACGACCAGCCGGTGCCGCCGGCGCTCGACCTCAACGGCAAGCACGTGGTGGTACTCGGCG
GCGGCGACACCGGCATGGACTGCAATCGCACCTCGGTGCGCCTGGGTGCCGCCTCGGTCACCTGCGTGTACCGACGCGGC
GAGGCCAGCATGCCCGGCTCGCGCCGCGAGATCGCCTACAGCCGCGAGGAGGGCGTGGGTTTCCTGTTCCATCACCAGCC
GCTGGCCCTGCTCGGCGAGCAAGGCCGGGTGCGCGGCGTGCGCCTGGTGCGTACCGAGGTGGGACGCGATGCGGACGGCC
GCGCGCGGCTGCAGCACGTCGAGGGCAGCGAGACCGAGCTGCGTGCCGACGTGGTGATCCAGGCGTTCGGCTTCCGTCCC
AGTCCGCCCGCGTGGTGCGCCACACATGGCATCGCTCTGGACGCCGGCGGCCGCATCCTGGCCGGCGACGCGGGTGCGCT
GCCGTTCCAGACCGGCCACCCGAAGATCTTCGCCGGCGGCGACAACATGCGCGGCGCCGACCTGGTGGTGCGCGCGGTGC
ACGACGGGCGCGAGGCAGCCGGCTCGATCGCACGAATGCTCGCCGAGCTTCCGCTGGAAGCGGTGGCCTGCGTGGCGTAA

Protein sequence :
MSDKLFQFLNLPRQPPKAVPVAIRVLGYGEISGDFAPAAAVGQAERCLDCGNPYCEHACPVHNYIPGWLKLVQDGRLFEA
ATLMHETNPLPEICGRVCPHDRLCEGACTLEQGGFGAVTIGSIERSITDEAFRQGWRPDLSGVVESGRRVAVVGAGPAGL
SCADRLRRAGIAVDVFDRQREIGGLLTFGIPPFKLDKTVIHTRRAVLEGMGVRFHLNVEIGRDLAFERLLADYDAVFLGT
GAYTFVDGELPGRELDGVHDALPFLIANANRLLDDQPVPPALDLNGKHVVVLGGGDTGMDCNRTSVRLGAASVTCVYRRG
EASMPGSRREIAYSREEGVGFLFHHQPLALLGEQGRVRGVRLVRTEVGRDADGRARLQHVEGSETELRADVVIQAFGFRP
SPPAWCATHGIALDAGGRILAGDAGALPFQTGHPKIFAGGDNMRGADLVVRAVHDGREAAGSIARMLAELPLEAVACVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YP0342 CAF28571.1 putative oxidoreductase Not tested YAPI Protein 2e-118 53