Gene Information

Name : R2APBS1_3350 (R2APBS1_3350)
Accession : YP_007591649.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.-
Position : 3541616 - 3543730 bp
Length : 2115 bp
Strand : -
Note : PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG

DNA sequence :
ATGGCCACCCGCCCCGTTCGTCCCGCTCCCGCTATCGGTACCGACCCGGGCATCACGTCTGTCGGTGCGCTGCCGGGCGT
CGGACCGGCGCTGGTGGCGTCACTGGCGCGGCTCGGGCTGGAGCGGGTGCAGGACCTGTGGTTCCACCTGCCGCTGCGCT
ACGAGGACAAGACCCGGATCAGCACGATCGCCGACCTGCGCGCGGGCGATCGCGCGCAGGTCGAGGGTGTGGTCGAGGCG
GTCGAGCGCGGCTTTCGTTATCGCCCGCAGCTGAAGGTGGCGATCGGCGACGCCAGTGGGCAGACTCTGCTGCTGCGCTT
CTTCCACTTCAACCGCGCACAGGCCGAACAGCTGCTGCCGGGCACGCGATTGCTCTGCTACGGCGAGGTACGCCATGCCG
CGCAGGGCCTGGAGATGGTGCACCCGAACTATCGGCGCCTGGACGGGGCGACGGTCGCCGCCGTCGACGAGTCGCTCAGC
CCGGTCTATCCGACCACCGAGGGGCTCGGCCCGAAGCGGCTGGCCGGGGTGATCGGCAAGGCGCTGGCGCTGCTGCCGCC
AGCGGCGCAACTGGAGCTGATCCCGCCCGAGCTGTGCGCGAAGCACGGGCTCACCTCGTTGCGCGACGCGTTGCTGTACG
TGCACCGTCCGCCGCCGGATGCGCATCTGGGCCAGTTGATGCTGGGCCGGCATCCGGCGCAGCAGCGCCTGGCGTTCGAG
GAACTGTTGACCCAGCACCTGAGCCTGAAGCGCATGCGCGCGGCGGTGCGGCGGCGGCGCGCGCCGGAACTGGGCGGCAC
GGGCGAGTTGCGCCGGCTGCTGCTGCAGGGGTTGCCGTTCCGGCTGACTGCGGCCCAGCAGCGCGTCGGCGAAGAGGTGG
CGCGCGACCTGGTCCGGCCGCAGCCAATGCTGCGGCTGGTGCAGGGCGATGTCGGATCCGGCAAGACCGTAGTTGCCGCG
CTGGCGGCGCTGGCGGCGGTGGAATCGGGGCACCAGGTCGCGCTGATGGCACCGACCGAACTGCTGGCCGAACAGCACCT
GCACAATTTCCGGCATTGGCTGCAGCCGCTCGGCATCGAGGTGGAGTGGCTGGCCGGCAAGGTCACCGGCAAGGCACGCA
AGCAGGTATTGGCGCGGGTGGCCGCCGGCGCGCCGGTGGTGGTCGGCACGCATGCGCTGATGCAGGAAGGCGTGGCGTTC
GCGCGGCTCGGCCTGGTGATCGTCGACGAGCAGCACCGCTTCGGCGTGCAGCAGCGGCTGGCGCTGCGCGACAAGGGCAG
GGACGGCGAACGGGTGCCGCACCAGCTGGTGCTGACCGCCACGCCGATCCCGCGCACGCTGGCGATGAGCGCCTATGCCG
ACCTGGACGTGTCCTCGATCGACGAGCTGCCGCCCGGGCGCACGCCGGTGCAGACCATCGCGATCTCCAACGCGCGGCGC
AGCGAGGTGATCGAGCGCATCCATGCCGCTTGCGGCGAGGGTCGCCAGGCGTACTGGGTGTGCACGCTGATCGAGGAATC
CGAGCAGCTGCGCGCGCAGGCGGCCGAGGTGGCGCATGTGGAGTTGTCCGCCGCGCTGGCCGGCTTCCGGGTCGGCCTGA
TCCACGGCCGCATGAAACCGAAGGAAAAACAGGCGGTGATGGACGCGTTCAAGGCCGGCGAACTGGCCGTGCTGGTGGCG
ACCACGGTGATCGAGGTGGGCGTGGACGTGCCGAACGCCAGCCTGATGGTGATCGAGAACAGCGAACGGCTCGGCCTGGC
CCAATTGCACCAGCTGCGCGGGCGGGTCGGCCGCGGTGCGGTGGCGTCGAACTGCGTGCTGCTGTACCAGCCGCCGTTGG
GCCAGCTGGCACGTGAGCGGCTGCAGGTGATGCGCGACACCAACGACGGCTTCCGCATCGCCGAGAAGGATCTCGAACTG
CGCGGCCCCGGCGAGGTGCTGGGCACCCGTCAGACCGGCCAGCTCAGCTTCCGTATCGCCGATCTCGCCCGCGACGCGCA
CCTGCTGCCGGCGGTGCAGCAGGTCGGGGAGCACATGCTGGCGGAGCACCCGCGGCAGACCACACAATTGATCGAGCGCT
GGATCGGCGGCGCAGCACGCTACGCACATGCGTGA

Protein sequence :
MATRPVRPAPAIGTDPGITSVGALPGVGPALVASLARLGLERVQDLWFHLPLRYEDKTRISTIADLRAGDRAQVEGVVEA
VERGFRYRPQLKVAIGDASGQTLLLRFFHFNRAQAEQLLPGTRLLCYGEVRHAAQGLEMVHPNYRRLDGATVAAVDESLS
PVYPTTEGLGPKRLAGVIGKALALLPPAAQLELIPPELCAKHGLTSLRDALLYVHRPPPDAHLGQLMLGRHPAQQRLAFE
ELLTQHLSLKRMRAAVRRRRAPELGGTGELRRLLLQGLPFRLTAAQQRVGEEVARDLVRPQPMLRLVQGDVGSGKTVVAA
LAALAAVESGHQVALMAPTELLAEQHLHNFRHWLQPLGIEVEWLAGKVTGKARKQVLARVAAGAPVVVGTHALMQEGVAF
ARLGLVIVDEQHRFGVQQRLALRDKGRDGERVPHQLVLTATPIPRTLAMSAYADLDVSSIDELPPGRTPVQTIAISNARR
SEVIERIHAACGEGRQAYWVCTLIEESEQLRAQAAEVAHVELSAALAGFRVGLIHGRMKPKEKQAVMDAFKAGELAVLVA
TTVIEVGVDVPNASLMVIENSERLGLAQLHQLRGRVGRGAVASNCVLLYQPPLGQLARERLQVMRDTNDGFRIAEKDLEL
RGPGEVLGTRQTGQLSFRIADLARDAHLLPAVQQVGEHMLAEHPRQTTQLIERWIGGAARYAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-88 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_3350 YP_007591649.1 ATP-dependent DNA helicase RecG BAC0356 Protein 3e-180 63