Gene Information

Name : R2APBS1_3132 (R2APBS1_3132)
Accession : YP_007591439.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3279872 - 3280882 bp
Length : 1011 bp
Strand : +
Note : PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein

DNA sequence :
ATGAACGCACGCATCGCCCCCACCACTCCGATCAACCTGCACCCGGATGTGATCATCCGCAGCGCACGCACGGTGATCGC
CACCGAAGCGGCCGCCGCGCTGGCGCTGGAGCCGCGGATCGGGCCGGCATTCGTCGAGGCCTGCCGGCTGATCCTGGGCT
GCCGGGGCCGCGTGGTGGTCAGCGGCATGGGCAAGTCCGGCCACATCGGGCGCAAGATCGCCGCCACGCTGGCCTCCACC
GGCACGCCGGCGTTCTTCGTGCACCCGGGCGAGGCCAGCCACGGCGACCTCGGCATGATCCTGCCGCAGGACGTGGTGCT
GGCGATCTCCTACTCCGGCGAGACCGACGAGCTGCTGTTCATCCTGCCGGTGATCAAGCGCCAGGGCATTCCGCTGATCG
CGATCACCGGCCGCCCGACCTCGTCGCTGGCGACCCAGGCCGACGTGCACCTGGACGGCAGCATCTCCAGCGAAGCCTGC
CCGCTGGGCCTGGCACCGACCACCAGCACCACCGTGGCGCTGGTGCTGGGCGACGCGCTGGCGATCGCGCTGCTGGAGGC
GCGCGGCTTCACTTCCGACGACTTCGCCCGCTCGCACCCGGCCGGCGCACTGGGCCGGCGCCTGCTGCTGCACATCAGCG
ACGTGATGCACAGCGGCGACGAGGTACCGCGGGTCGCGCCCGACGCCAGCCTCACCGCCGCCCTGGTCGAGATGACCCGC
AAGCACCTGGGCATGACCGCCGTGGTCGACGCCGAACAACGCTTGCTGGGGGTCTTTACCGATGGCGACCTGCGCCGCGC
GCTGGACGACGACGGCGTGGACCTGCGCGGTGCCACCGTGGCCGAACTGATGACGCGCGGCCCGAAGACGATCGGCGCCG
ACAAGCTGGCGGCGGAAGCGGCGCAGCTGATGGAGAAGTACCAGATCCACGCGCTGCTGGTGGTCGACGACGAGCAGCGC
GTGGTCGGCGCGCTGAACATTCACGATCTGCTCCGTGCGCGTGTTGTCTGA

Protein sequence :
MNARIAPTTPINLHPDVIIRSARTVIATEAAAALALEPRIGPAFVEACRLILGCRGRVVVSGMGKSGHIGRKIAATLAST
GTPAFFVHPGEASHGDLGMILPQDVVLAISYSGETDELLFILPVIKRQGIPLIAITGRPTSSLATQADVHLDGSISSEAC
PLGLAPTTSTTVALVLGDALAIALLEARGFTSDDFARSHPAGALGRRLLLHISDVMHSGDEVPRVAPDASLTAALVEMTR
KHLGMTAVVDAEQRLLGVFTDGDLRRALDDDGVDLRGATVAELMTRGPKTIGADKLAAEAAQLMEKYQIHALLVVDDEQR
VVGALNIHDLLRARVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 5e-53 49
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-53 49
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 8e-53 49