Gene Information

Name : R2APBS1_0306 (R2APBS1_0306)
Accession : YP_007588717.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 349400 - 349600 bp
Length : 201 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGGATAACCACGTACGCGAGCTGCGCAGCGAGCACGGCTGGTCGCAGGCCGATCTGGCCGAGCAACTGGATGTGTCGCG
GCAGACCGTCAACGCGATCGAGACCGGCAAGTACGACCCCAGCCTGCCGCTGGCGTTCAGGATCGCGAAATTGTTTGGAC
GTCCGATTGAATCGATTTTTGACCCAGGGAGCAGCAGGTGA

Protein sequence :
MDNHVRELRSEHGWSQADLAEQLDVSRQTVNAIETGKYDPSLPLAFRIAKLFGRPIESIFDPGSSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-12 52
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 9e-08 48
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-07 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_0306 YP_007588717.1 putative transcriptional regulator VFG2168 Protein 4e-08 48
R2APBS1_0306 YP_007588717.1 putative transcriptional regulator VFG2175 Protein 4e-08 48