Gene Information

Name : R2APBS1_2615 (R2APBS1_2615)
Accession : YP_007590933.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2775362 - 2776555 bp
Length : 1194 bp
Strand : +
Note : PFAM: Phage integrase family

DNA sequence : 
ATGGCCCTTCTCACTGACACCAAAGTACGCAGTGTCAAACCTGGAGGCGCTCCGCTCGCACATGGCGGCGTCACCGGGTT
GACGCTCCACCCATCCCCCAGCAACAAAGGGCAAGGCAAGTGGGTTCTCCGCTACGTCAGCCCTGTAACCAAGAAGCGTC
GTAACGCAGGGCTAGGCAGCTACCCCGAGGTCAGCATTGCCGAGGCAGCACAACAAGCTCGCTTCATGCGCGAGCAGATC
GCCCACGGGAAAGACCCGCTGGAAACCAGGGCCGCCGAAGCTGCCCAGCCGCATCTGCCCAAGCTCAAAGAAGCGGCAAA
GACCCTGCACAAAGAGCTGGCTCCCGGCTGGAAGAATCCCAAGCATTCCCAGCAGTGGATCAATACCCTTACCGAGTACG
CCTTTCCACTGATCGGTGCGATGCCGCTGGATCAAATCCAGCCGCGCCATATCGCCGATGTGCTGCGACCCATCTGGTTG
GAAAAAGCTGAGACGGCAGGACGAGTCAAGCAACGGCTACACGCGGTCATGGCGTGGGGGTGGGCACACGGCTTCTGCCA
GTCCAACCCAGTCGACGTGGTAAATCACCTCCTGCCCCTCCAGCCGGGCAAGACAGTCCGCACACAGCACCAGCCTGCGA
TGCCTTGGACGTTGATTCCCGCGTTCGTGGCCGACCATCTGCCGCAAAGCCTTGAAGTATCGCGCCAACTCTTGGGGTTT
GTGATTCTGACGGCTGCCCGCTCGGGCGAGGTGCGCCACATGACGTGGGATGAGGTGGACTTAGATGCCAAGCTCTGGAC
GGTGCCTGCGGAACGAATGAAGGCCAAGCTAACCCACCGCGTGCCGCTTTCCAAGCAAGCCGTAGCGCTTCTCAAGCACC
AACAAGGGCTGCACCACACGTTTGTGTTCCCGTCCGTGCGCAAGGGCGTCCCGTTGTCGGACATGGTTCTAACGGCCTTT
CTGCGGCGAGCGAAGGCCGTCAGTGACGTTCCAGGCCGTGTAGCCACCGCTCACGGCTTCCGATCCAGCTTCCGCGACTG
GTGTAGCGAGAAGGGGTATGCGCGCGACTTGGCCGAAAGAGCGTTGGCGCACACCGTGCAGAACAAGGTGGAGGCGGCCT
ATCACCGAACCGACCTGCTGGAGCAACGTCGCCCGCTCATGCAGGCGTGGGCGGACTTCGTGACATCTGGCTAA

Protein sequence : 
MALLTDTKVRSVKPGGAPLAHGGVTGLTLHPSPSNKGQGKWVLRYVSPVTKKRRNAGLGSYPEVSIAEAAQQARFMREQI
AHGKDPLETRAAEAAQPHLPKLKEAAKTLHKELAPGWKNPKHSQQWINTLTEYAFPLIGAMPLDQIQPRHIADVLRPIWL
EKAETAGRVKQRLHAVMAWGWAHGFCQSNPVDVVNHLLPLQPGKTVRTQHQPAMPWTLIPAFVADHLPQSLEVSRQLLGF
VILTAARSGEVRHMTWDEVDLDAKLWTVPAERMKAKLTHRVPLSKQAVALLKHQQGLHHTFVFPSVRKGVPLSDMVLTAF
LRRAKAVSDVPGRVATAHGFRSSFRDWCSEKGYARDLAERALAHTVQNKVEAAYHRTDLLEQRRPLMQAWADFVTSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 6e-129 66
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 6e-129 66
int AAL08426.1 integrase Not tested SRL Protein 3e-129 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_2615 YP_007590933.1 Integrase VFG0672 Protein 2e-129 66