Gene Information

Name : R2APBS1_2609 (R2APBS1_2609)
Accession : YP_007590927.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2767293 - 2767982 bp
Length : 690 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB

DNA sequence : 
GTGCACAAACGCATCCTGATCGTTGAAGACGAAACCTCGATCCGCGAGATGATCGCCTTCGCCCTGCGCAAGGCCGGCAT
GGATGCGATCCAGGCGGCCGATGCCCGTGCCGCCCAGCTGGCGCTGGCCGAGCAGGTGCCCGACCTGATCCTGCTCGACT
GGATGCTGCCGGGCATGAGCGGCCTCGAACTGGCCCGGCGCCTACGCAAGGAAGAGCTCAGCCGCGAGATCCCGATCATC
ATGCTCACCGCCCGCGGCGAGGAAATGGATCGCGTCAACGGCCTCGAGGCCGGCGTCGACGACTACGTGGTGAAACCCTT
TTCCACCCGCGAGCTGGTTGCCCGGATCAAGGCCGTGCTCAGGCGCAGCCAGGGCGACGACGGCTCCGGCGTGGTCGAGC
TGGGCGGCCTGCGCATCGACGGCCCGGCGCACCGGGTGTTCGCCGGCGACGAGCCGGTGCCGATCGGTCCCACCGAATAC
CGCCTGCTGTATTTTTTCATGACCCATCCCGAGCGCGTCTACTCGCGCACGCAACTGCTCGACCACGTCTGGGGCGGCAG
CGTGTACGTGGAGGAGCGCACCGTGGACGTGCACATCCGCCGCCTGCGCAAGACGCTGGAGCCGTGGAAGCTGGACGAAC
TGGTGCAGACCGTGCGCGGCACCGGCTACCGCTTCTCGACCAGCACCTGA

Protein sequence : 
MHKRILIVEDETSIREMIAFALRKAGMDAIQAADARAAQLALAEQVPDLILLDWMLPGMSGLELARRLRKEELSREIPII
MLTARGEEMDRVNGLEAGVDDYVVKPFSTRELVARIKAVLRRSQGDDGSGVVELGGLRIDGPAHRVFAGDEPVPIGPTEY
RLLYFFMTHPERVYSRTQLLDHVWGGSVYVEERTVDVHIRRLRKTLEPWKLDELVQTVRGTGYRFSTST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 2e-34 43
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB CP004022.1.gene1676. Protein 2e-23 42
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 1e-29 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 4e-30 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB AE015929.1.gene1106. Protein 5e-25 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 1e-29 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB NC_012469.1.7685629. Protein 8e-30 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB FJ349556.1.orf0.gene Protein 4e-31 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB AE000516.2.gene3505. Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB VFG0596 Protein 3e-20 41
R2APBS1_2609 YP_007590927.1 phosphate regulon transcriptional regulatory protein PhoB VFG1389 Protein 1e-21 41