Gene Information

Name : R2APBS1_0242 (R2APBS1_0242)
Accession : YP_007588653.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 282284 - 282652 bp
Length : 369 bp
Strand : +
Note : PFAM: IS66 Orf2 like protein

DNA sequence :
ATGAGCATGAAGCGGAGTGGAGTGGGCGGCACAGGTCGACCGTGCGCATGGTGGCTGGTGAGTGCGCCGGTAGATTTTCG
CTGTGGTGCGGATCGGCTGCTGGTGCACGTGCGCGAAGTGCTGGGGCGGGAACCGTTGGACGGTTCAGCGTATGTGTTCC
GCAACCGCCGCGCCACACGCATCAAGGTGCTGATGGTGGACGCGCAGGGCGTGTGGCTCTCGGTGCGTCGATTGCATCAG
GGGCGATTCGTCTGGCCGTCGGCGGGTGAGACGCTGTGGTCGCTCGGTCACGCGCAGTTCGCATGGTTGTGTGCGGGAGT
GGACTGGCAGCGTTTGAGCGCGCCGATGCCGCTTGAAAAATGCGTGTAA

Protein sequence :
MSMKRSGVGGTGRPCAWWLVSAPVDFRCGADRLLVHVREVLGREPLDGSAYVFRNRRATRIKVLMVDAQGVWLSVRRLHQ
GRFVWPSAGETLWSLGHAQFAWLCAGVDWQRLSAPMPLEKCV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1163 NP_286698.1 hypothetical protein Not tested TAI Protein 8e-17 48
Z1602 NP_287106.1 hypothetical protein Not tested TAI Protein 8e-17 48
EXB18 ABD94704.1 ISPpu14 transposase Orf2 Not tested ExoU island B Protein 9e-14 44
unnamed ABR13518.1 transposase Not tested PAGI-7 Protein 6e-14 43
RL060 AAP84185.1 transposase Not tested PAPI-1 Protein 8e-13 41