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Name : R2APBS1_2152 (R2APBS1_2152) Accession : YP_007590503.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2310129 - 2311406 bp Length : 1278 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGCGGAACATGGAGAACACCAAGCTCGCCATCGTGGGCCTGGGCTACGTCGGCCTGCCGCTCGCCGTGGAGTTCGGCAA GCACTACGACACCGTCGGCTTCGACATCAAGAAGGCCAGGATCGATGAGCTGGTTGCCGGTCGCGACAACACGCTGGAAG TGGACACCGCCGAACTGGCCGCGGCCACGCGCCTGCGCTTCAGCGCGGAGCTGGACGACCTGCGGGACCGCGACACCTAC ATCGTCACCGTGCCCACGCCGATCGATCTCGCCAAGCGCCCGGACTTGACGCCGCTGATCAAGGCCAGCGAAACCCTGGC CAAGGTGCTCAAGCCCGGCGACGTGGTGGTGTACGAATCCACCGTGTATCCCGGTTGCACGGAAGAAGTGTGCGTCCCGA TCCTCGAAAAAGGTTCTGGTCTGGTCTACAACCGCGATTTCTTCGCCGGCTACAGTCCCGAACGGATCAACCCGGGCGAC AAGCAGCATCGCGTCACCGGCATTCGCAAGGTCACGTCGGGCTCCACGCCGGAAACGGCCGATTTCGTCGATCGCCTGTA CAGCTCGGTGATCACCGCCGGCACGTACCGGGCCAGCTCGCTGAAGGTGGCCGAGGCGGCCAAGGTCATCGAGAACACCC AGCGCGACCTGAACATCGCGCTGGTCAACGACCTGGCCATCCTGTTCAACAAGCTGGGCATCGACACGCTGGAAGTGCTC GAGGCCGCCGGCACCAAGTGGAACTTCCTGCCGTTCCGCCCGGGCCTGGTGGGCGGCCATTGCATCAGCGTGGATCCGTA CTACCTCACGCACAAGGCACAGGAGGTGGGCCATCATTCGGACGTGATCCTGGCCGGCCGCCGCACCAACGACGGCATGG GGCCGTACATCGCCGGCGAAGTGATCCGCCTGATGGTGCGCAAGGGCATCAACCCGGTGCAGGCGCGCGTGCTGATCCTG GGCCTGGCGTTCAAGGAGAACTGCCCGGACCTGCGCAACACCCGCGTGGTCGACATCGTGCTGGCGCTGCACGGCTACAA CGCCCAGGTCGATGTCCACGATCCGTGGATCAACGCCGCCGAAGCCGAGCACGAATACGCCATCACGCCCCTCGCCCAGC CGCAAACCGGCAGCTACGACGCGGTGATCATCGCGGTCGGCCACCAGCAGTTCGTCGGCATGGGCCCGGCCGGCATCCGC GCGTTCGGCAAGGCCGCCTCGGTGCTGTACGACGTGAAATGCCTGCTGCCGCGCGAAGCGGTCGACGGCCGCCTCTGA Protein sequence : MRNMENTKLAIVGLGYVGLPLAVEFGKHYDTVGFDIKKARIDELVAGRDNTLEVDTAELAAATRLRFSAELDDLRDRDTY IVTVPTPIDLAKRPDLTPLIKASETLAKVLKPGDVVVYESTVYPGCTEEVCVPILEKGSGLVYNRDFFAGYSPERINPGD KQHRVTGIRKVTSGSTPETADFVDRLYSSVITAGTYRASSLKVAEAAKVIENTQRDLNIALVNDLAILFNKLGIDTLEVL EAAGTKWNFLPFRPGLVGGHCISVDPYYLTHKAQEVGHHSDVILAGRRTNDGMGPYIAGEVIRLMVRKGINPVQARVLIL GLAFKENCPDLRNTRVVDIVLALHGYNAQVDVHDPWINAAEAEHEYAITPLAQPQTGSYDAVIIAVGHQQFVGMGPAGIR AFGKAASVLYDVKCLLPREAVDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-133 | 62 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-133 | 62 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-105 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| R2APBS1_2152 | YP_007590503.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 5e-134 | 62 |
