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Name : R2APBS1_2079 (R2APBS1_2079) Accession : YP_007590436.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Unknown Product : pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component Function : - COG functional category : - COG ID : - EC number : - Position : 2233443 - 2234768 bp Length : 1326 bp Strand : + Note : PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA sequence : GTGATCGGGGCCGGTACCGGCGGTACGGGCGTCGCCCGCATGGCTGCGGCGGCAGGCTGGAAGGTCGCCGTGGTCGATAG CTTGCCTTATGGCGGTACGTGCGCCTTACGCGGGTGTGACCCCAAAAAAATGCTGATCGCCGTGACCGAGGGCGTCGACT GGGCGCGCAACTTGAAAGGCAAGGGGCTTCGGGCGCAAACCGCTGTCGATTGGCCCGACATGATCGCTTTCAAGCGCAGC TTTACCGACCTCATGTCAGGTCGGATCGAAGCCGGGATGCAGCGGGCCGGTGTCGTTCCCCTGCATGGCCAGGCCCGCTT CACCGGACCAAACACGATTGAAGTGAATGGCGAACTCCTGACCGCTCGGCATTTTCACCTTGCCACCGGCGCCCGGCCGA TGACCTTGAATATCCCGGGCGAAAACCTGCTGATCACCAGCACCGACTTCCTCGAATTGCCGGAGCGGCCGGACAGGGTC GTCTTCGTCGGCGGCGGATTCATCGCGATGGAATTTGCCCACATCTGCAAACGCGCCGGCTCAAGGGACGTCACGGTACT AGAAATGATGAAGCGCCCGTTGGGCAATTTCGACCCCGACATGGTCGGCATGCTTTCCGAAGCGACCGCCGATCTGGGCA TCGACCTGCGGACCGAGGCCAGGGTGTTGACGATCGAGCAGGACGGCGCCGGGTTCATCGTGACCTATGAAACGCCGCAA GGCACCCAGACCATTGCCTGCGACAGGGTGGTGCATGCCACCGGGCGCGTGCCCAACATCGAGCATCTCAACCTGGACGC CGCGGGCGTGGCCTACGGCCGTAAGGGCATCCAAGTCAGTCCCTTCATGCGCACGACCAACCCGGCGATCTTCGCGGCCG GCGACTGCGCGGACAGCGGCCCCAATCTCACCCCGGTCTCGGCCAACGAGGGCCGGATCGCGGGCAAGAACCTGCTCGCC GGAAAAGACGAGCGCGCGATCCACTACCCGCCGATCCCCAGCGTCGTCTTCACGCTTCCGCCCGTGGCGTCCGTCGGGCT GTCCGAAGACGCGGCACGCGAGCAGGGGCTGGACTTTGACGCGCATTTCGAGATAACCGCGCAGTGGTATTCCTCCCTGC GCGTGGGCGCGCGACACAGCGCCTACAAGGTGTTGGTCGAGAAAGGCAGCGGGAACATCCTGGGCGCGCATCTGATCGGC CCCGGCGCCGAGGAACAGATCAATCTGCTCGCCATGGCCATGGGCGCTGGACTGACGGCGAACAAGCTCAAGGGCATCAT CTTTGCCTATCCCAGCTATGCCTCGGACATCAGTTCGATGGTGTAG Protein sequence : MIGAGTGGTGVARMAAAAGWKVAVVDSLPYGGTCALRGCDPKKMLIAVTEGVDWARNLKGKGLRAQTAVDWPDMIAFKRS FTDLMSGRIEAGMQRAGVVPLHGQARFTGPNTIEVNGELLTARHFHLATGARPMTLNIPGENLLITSTDFLELPERPDRV VFVGGGFIAMEFAHICKRAGSRDVTVLEMMKRPLGNFDPDMVGMLSEATADLGIDLRTEARVLTIEQDGAGFIVTYETPQ GTQTIACDRVVHATGRVPNIEHLNLDAAGVAYGRKGIQVSPFMRTTNPAIFAAGDCADSGPNLTPVSANEGRIAGKNLLA GKDERAIHYPPIPSVVFTLPPVASVGLSEDAAREQGLDFDAHFEITAQWYSSLRVGARHSAYKVLVEKGSGNILGAHLIG PGAEEQINLLAMAMGAGLTANKLKGIIFAYPSYASDISSMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 7e-86 | 41 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 1e-85 | 41 |
