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Name : R2APBS1_2009 (R2APBS1_2009) Accession : YP_007590367.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Unknown Product : type IVB pilus formation outer membrane protein, R64 PilN family Function : - COG functional category : - COG ID : - EC number : - Position : 2157345 - 2159024 bp Length : 1680 bp Strand : + Note : PFAM: Secretin N-terminal domain; Bacterial type II and III secretion system protein; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family DNA sequence : ATGTCCAGGAAGCTACTTGCCGCAGCGATCTCGGCGATCGTTCTCGGTCTGGCCGGGTGCGCCAATCCGGTCAAGCAGTC CATGCGGCAAGTCGACCAGATCGACCGTGACGCAAGCACCCAGATCTCGAGCATGCGCTCGACGTCGAATGACCAGTCGG TCTATGCCACCCACGATGGCCAGTGGGTTGACCCGAACCCCATTGCGCTCGATGCAAGCCGCACCGCGCCGCAGCTGTCC TGCAACGAGAACTTCAACCCGCATCGGCTGATTGGCCTGCAGGAGTTCGCGCAGATCATCAGCCGCGACTGCAACATCCC CGTCCAGGTGACGCCCGATGCCCTCGCGCATCTCAGCGACGCCCCCAGCACACCCGGCGCGGGCACAGCTCCGGTTCCCG CGTCCCAGTACGGCGCCTCTGGCGTCACGCTCCCCGGTGTTCGCGGTGCGGGTATCGACGCCATGGGTATCGAGACGCCG CAGCGGTCCATCGACCTCAAGTACTCGGGGCCGCTTTCCGGGCTCCTCGATGCGGCGACCTCGCAGCTGGGCCTGGGTTG GAAAGTGCAGGAAGGGCAGGTGGTGATTTTCTACACCGAGTCGCGCACGTTCCGCTTCAACATGATTCCGACCTCGACGA CGATGAATACCACCGTCGAGGCCGGCACCACCACGTCGGCCGGCATCAGCGGGTCGGGCGGCGGTGGGAGTGGCGGTGGC AGCACCGGCGGGGTGTCCGGCAAGTCGGGCACGAATCAGTCCACCGACGTCACTCTCAAGAACGACCCGCGCAGCGACTT CGAGACCACCATCAAGTCGATGCTCTCCAAGAACGGACGCATGGGCCCGCTGACCGCTACCGGCACGATCACGGTGACCG ATACGCCGGAGGTACTGGACGCCATCGCCTCCTACATCCACGCCCAGAACGCCATTCTGACCAAGCAGGTGCTGTTCAAC GTGAAGGTCATCAGCGTCACGCTGACCAAGACCGACAACTACGGGATCAACTGGGGCCTGGTCTTCAAGGACGTCGCCGG CAAGTACGGCTTCAACCTCGCCAACACGTTCGCCGCGAATCCGGACTCCGTGACGGGGGCAATCAGCATCCTGCAATCGG CCACCGGCCATACCGCGCAGTTCGCCGGTTCGCAGGCCGTCATCAGCGCGCTGGCAGAGCAGGGGAAGGTGGGCGTGGTT ACCTCGCCGTCGGCGACGACGCTGAACATGCAACCCGTGATCGTGCAGGTGGCCCACCAGACGAGCTACCTGGCCAGCTC GCAAACCAGCAATGTCGCCTCGGTCGGCAGCAGTACGGCGTTGCAGCCCGGGCTTATCACGTCGGGCTTCAATATGGACC TGGTGCCTGACGTACTGGAGGACGGGAAGACGATCCTCCTCCAGTACAACATGTCGCTGTCTTCGGACCCGACGCTGCGG ACGGTCACCAGTGGCAATTCCTCGGTCGAGCTGCCGACCATGGACGCCAAGGTCCTCAGCCACAAGGTGCGTCTGCGCAG CGGCGAGACGCTGATTCTTTCCGGGTTCGAACAGACCAGCAACAACGGTACCCGCCAGGGCATCGGTTCGCCGTCCTTCT GGATCCTCGGCGGCGGCATGCGCCGTGCTGACCAGCGGGTGGTGCTGGTCGTGATGATCACTCCCATCGTGACCGACTGA Protein sequence : MSRKLLAAAISAIVLGLAGCANPVKQSMRQVDQIDRDASTQISSMRSTSNDQSVYATHDGQWVDPNPIALDASRTAPQLS CNENFNPHRLIGLQEFAQIISRDCNIPVQVTPDALAHLSDAPSTPGAGTAPVPASQYGASGVTLPGVRGAGIDAMGIETP QRSIDLKYSGPLSGLLDAATSQLGLGWKVQEGQVVIFYTESRTFRFNMIPTSTTMNTTVEAGTTTSAGISGSGGGGSGGG STGGVSGKSGTNQSTDVTLKNDPRSDFETTIKSMLSKNGRMGPLTATGTITVTDTPEVLDAIASYIHAQNAILTKQVLFN VKVISVTLTKTDNYGINWGLVFKDVAGKYGFNLANTFAANPDSVTGAISILQSATGHTAQFAGSQAVISALAEQGKVGVV TSPSATTLNMQPVIVQVAHQTSYLASSQTSNVASVGSSTALQPGLITSGFNMDLVPDVLEDGKTILLQYNMSLSSDPTLR TVTSGNSSVELPTMDAKVLSHKVRLRSGETLILSGFEQTSNNGTRQGIGSPSFWILGGGMRRADQRVVLVVMITPIVTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilN | CAI36059.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 1e-69 | 41 |
