|
Name : R2APBS1_1671 (R2APBS1_1671) Accession : YP_007590036.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 1817842 - 1819374 bp Length : 1533 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGAGCGAAGCGACCGATACCCAGCCCGTCGACGAGAACAAGCCGGACGTCAATCGACTCGTTGCCGAGCGTCGCGAGAA ACTGAAGGCGCTGCGCGGGCAAGGCATTGCGTTCCCGAACGACTTCAAGGTCGACAGCTTCGCCGGTGATTTGCAGACCG AGTTCGCCGACAAGGACGTGCACACGGCCGAGGCGGTCGAGGCTGCCGTGCGCCGGGTGAAGATGGCCGGGCGCATCGTG CTCAAGCGCGTGCAGGGCAAGGTCAGCTTCGTGCAGCTGCAGGATTTCAGCGGGCGCATCCAGCTGTTCATCCACCAGGG CACGCTGGGCGAGGCCTACGAGGCGTTCAAGGGCTGGGACGTGGGTGACATCGTGGGCGCCGAAGGCGTGCTGATGCGCA CCAAGACCGGCGAGCTTTCCGTCCGGGTCGACCGGCTGCGCCTGCTGACCAAGAGCCTGCGCCCGCTGCCGGACAAGTTC CATGGTCTGGCCGACGTGGAGCAGCGCTATCGCCAGCGTTACGTCGACCTGATCGTCACCGAGGAGGCGCGGCGCACCTT CATGCTGCGCTCGAAGATCATCGGCTTCATGCGCCAGTGGCTGGAAGCGCCGTCGCGCCGCTTCATGGAAGTGGAGACGC CGATGATGCACGTGATTCCCGGTGGTGCCACGGCCAAGCCGTTCGTCACCCATCACAACGCGCTGGATCTGGACCTGTAC CTGCGCGTGGCGCCGGAGCTTTATCTCAAGCGCCTGGTCGTGGGCGGCTTCGACCGCGTCTACGAGATCAACCGCAACTT CCGCAACGAGGGCGTGTCGACCCGGCACAACCCCGAATTCACCATGCTGGAGCTGTACCAGGCCTACGCGACCTACCACG AGATCATGGACCTCACCGAGGCGGTGATCCGCGACACCGCGCAGGCCGTGCTGGGCACCACGCAGCTGGAATGGGACGGC GCCGCGATCGACGTCGGCCCGGCGTTCCGCCGCTGGCGCATGGAAGACGCCGTGCTGGAACACAACCCCGGGATCCGGCG CGAGGAACTGCGCGACCGCGAGGCGATGGCCGCGCATGCCAGGCGCCTGGGCGTGCAGGTCAAGCCCGGCTACGGCTGGG GCAAGCTGTTGCTGGAAATCTTCGAGAAGACCGTCGAACACACCCTGATCCAGCCCACCTTCATCACCGACCATCCGGTG GAGGTGTCGCCGCTGGCGCGCGAGAGCGACACCGACAAGGGCATCACCGACCGCTTCGAGCTGTTCGTCGGCGGCAAGGA GATCGCCAATGGTTTCTCCGAGTTGAACGACCCGGAGGACCAGGCCGCGCGCTTCCAGGCCCAGGTCGACGCCAAGGACG CCGGCGACGACGAGGCGATGCATTTCGATGCCGACTACATCCGCGCACTGGAAGTGGGCCTGCCGCCCACTGGCGGGCTC GGCATCGGCATCGACCGGCTGGTGATGCTGCTGACCGGCTCGTCCTCGATCCGCGACGTGCTGCTGTTTCCGTACATGCG GCCGGAGGCGTGA Protein sequence : MSEATDTQPVDENKPDVNRLVAERREKLKALRGQGIAFPNDFKVDSFAGDLQTEFADKDVHTAEAVEAAVRRVKMAGRIV LKRVQGKVSFVQLQDFSGRIQLFIHQGTLGEAYEAFKGWDVGDIVGAEGVLMRTKTGELSVRVDRLRLLTKSLRPLPDKF HGLADVEQRYRQRYVDLIVTEEARRTFMLRSKIIGFMRQWLEAPSRRFMEVETPMMHVIPGGATAKPFVTHHNALDLDLY LRVAPELYLKRLVVGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTEAVIRDTAQAVLGTTQLEWDG AAIDVGPAFRRWRMEDAVLEHNPGIRREELRDREAMAAHARRLGVQVKPGYGWGKLLLEIFEKTVEHTLIQPTFITDHPV EVSPLARESDTDKGITDRFELFVGGKEIANGFSELNDPEDQAARFQAQVDAKDAGDDEAMHFDADYIRALEVGLPPTGGL GIGIDRLVMLLTGSSSIRDVLLFPYMRPEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-119 | 54 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-74 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| R2APBS1_1671 | YP_007590036.1 | lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 9e-120 | 54 |
