Gene Information

Name : R2APBS1_0136 (R2APBS1_0136)
Accession : YP_007588551.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 136701 - 137840 bp
Length : 1140 bp
Strand : +
Note : PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase

DNA sequence : 
ATGATCCAATCGCTTGCCAATGCCCGCGTACTCACCCCCGACGGCTGGCGCGACGACCTCGTCGTGCTGCTGGAGGGCGA
GCGCATCGCCGACCTGCTGCCGCCATCCGATCCGCGCGTGCGTGATGCGCAACAGCACGATCTTGGCGGCGCGATGCTGG
TGCCCGGCTTCATCGACGTGCAGGTCAATGGCGGCGGTGGCGTGCTGTTCAACGAGGCGCCCACGGTGGAAACATTGCGC
CGGATCGGCGCCGCGCATCGGCGCTTCGGCACCACCGGCTTCCTGCCGACCCTGATCAGCGACCGCGTGGAGGTGATGCG
CGCAGCGCTGGCCGCGGTGGAGCAGGCGCTGGCCGAAGGCGTGCCGGGCGTGCTCGGCATCCATCTGGAAGGCCCCTACC
TGGCGCCGGCGCGCAAGGGCGTGCACGACGCAAAGTATTTCCACGCGCCGAACCGCGACGAGTTGGCGCTGCTGTGCGCA
CCGCACCGCGGCGTGCGTCTGCTCACGCTGGCGCCGGACCAGGTGCCGACGGCCAGCATCGGTGCGCTGGTTGACGCCGG
GGTGATCGTCTGCGCCGGACATACCGCAGCCGACTACGCCACCACCCGTACCGCGCTCGCGGCCGGCGTGCGCGGCTTCA
CCCACCTGTTCAACGCGATGACCCCGTTCGGCAGCCGCGAGCCCGGCGTGGTCGGCGCCGCGCTGGAGGATGCCGACAGC
TGGTGCGGCATCATCGTCGACGGCCACCACGTGCACCCGGCCAGCCTGCGCGTGGCGCTCGCCGCCAAGCCGCGCGGCAA
GCTGCTGCTGGTCACCGACGCGATGCCGCCGGTCGGTGCGGATCGTCCCGACTACGTGCTGAATGGCGAAACGATCATCG
TGAAAGACGGCATCTGCCAGACCGCGCAAGGCGTGCTGGCCGGCTCCGCGCTGGACATGGCCAGCGCCGTGCGCAACGGC
GTGGAAATGCTCGGCCTGCCGCTGGACGAGGCCGTGCGCATGGCCAGCAGCTACCCGGCCGAGTTTCTCGGCCTGGCTGA
AAGCCATGGCCGCATCGCGGTGGGCTGCCGCGCCGACCTGGTGACGCTGGATGACGACTACCGCGTGCGGTGGCGCTGGG
TTGGCGGCGTGGGAGAGTAA

Protein sequence : 
MIQSLANARVLTPDGWRDDLVVLLEGERIADLLPPSDPRVRDAQQHDLGGAMLVPGFIDVQVNGGGGVLFNEAPTVETLR
RIGAAHRRFGTTGFLPTLISDRVEVMRAALAAVEQALAEGVPGVLGIHLEGPYLAPARKGVHDAKYFHAPNRDELALLCA
PHRGVRLLTLAPDQVPTASIGALVDAGVIVCAGHTAADYATTRTALAAGVRGFTHLFNAMTPFGSREPGVVGAALEDADS
WCGIIVDGHHVHPASLRVALAAKPRGKLLLVTDAMPPVGADRPDYVLNGETIIVKDGICQTAQGVLAGSALDMASAVRNG
VEMLGLPLDEAVRMASSYPAEFLGLAESHGRIAVGCRADLVTLDDDYRVRWRWVGGVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_0136 YP_007588551.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 7e-56 41