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Name : R2APBS1_1180 (R2APBS1_1180) Accession : YP_007589569.1 Strain : Rhodanobacter sp. 2APBS1 Genome accession: NC_020541 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : 3.6.1.- Position : 1289876 - 1291270 bp Length : 1395 bp Strand : + Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: phage replicative helicase, DnaB family, HK022 subfamily; replicative DNA helicase DNA sequence : ATGTCCTTCGTGCCCGAGCGCAAACCTTCCTCTCCCGCCATCGAGGCACTGCGGGTGCCGCCGCATTCCATCGAGGCCGA GCAGGCGGTGCTGGGCGGCCTGATGCTGGCGCCGGATGCGCTGGACAAGGTGGCCGATCGGCTCGGCGAGGACGATTTCT ACCGCAAGGACCACCGGCTGATCTGGCGTGCGATCAACGAGCTGGCGAACAAGGGCATGCCGTGCGACGCGGTGACCCTG GGTGACTGGTTCGAGAGCAACGGCCTGGCCGAGATGGTCGGCGGCGCCGGCTACCTGATCGAGCTGGCCAACAGCACGCC CAGCGCCGCCAACATCGCCGCCTACGCCGAGATCGTGCGCGAGAAATCGGTGCTGCGCCAGCTGATCGACGCCGGCACCT CGATCACCGAGGACGGCTACCGGCCCGAGGGCAAGAGCGTGCACGAGGTGCTGGAAAGCGCCGAGCAGCGCGTGTTCCAC ATTGCCGAATCCGGCGCGCGCGGCAAGAAAGACTCCGTCTCCATGCGCGAGGCGGTGAAGGACGCGTTCCGCCTGCTCAC CGAGCGCTACGAGAACCGCGGCCAGCTGACCGGCGTCAGCACCGGCTTCACCGACCTGGACAGGCTCACCTCCGGCCTGC AGCCGTCGGACCTGATCATCGTGGCGGCGCGCCCGTCGATGGGCAAGACCGCCTTCGCGCTGAACATCGCCGAGGCCGCC GCGCTGGGCGGCAAGAAGGCGGTGGTGGTGTTCTCGATGGAAATGTCCTCCTCGCAGCTGGCCTTCCGGCTGATCTCCTC GGTCGGGCGCATCCACCAGCAGCATCTGCGCAACGGCGACCTGCAGGAGGAGGACTGGCCGCGCGTGTCCAATGCGATCG CGCTGCTGTCCGAAGCGAAGATCTTCATCGACGACACGCCTGGCCTGTCGCCGGTGGAGCTGCGCTCGCGCGCGCGCCGG CTGCACCGCGAGCACGGCGGGCTGGGCCTGATCGTGATCGACTACCTGCAGCTGATGCAGGTGCCCGGCAACAAGGAGAA CCGCGCCACCGAGATCTCGGAGATCTCGCGCTCGCTGAAGGGGCTGGCCAAGGAGCTGAACGTGCCGGTGATTGCCCTGT CGCAGTTGAACCGCTCGCTGGAGCAGCGCGCCGACAAGCGTCCGATGATGTCCGACCTGCGCGAATCCGGCGCGATCGAG CAGGACGCCGACGTGATCATGTTCATCTACCGCGACGAGTACTACAACAAGGAATCGCCCGACAAGGGCGTCGCCGAGAT CATCATCGGCAAGCAGCGCAACGGCCCCACAGACACCTGCAAGCTCACCTTCCTCGGCCACTACACCCAGTTCGTGAACT ACGCGTCGGATTCGTTCGTCGGCTCGTTCGACTGA Protein sequence : MSFVPERKPSSPAIEALRVPPHSIEAEQAVLGGLMLAPDALDKVADRLGEDDFYRKDHRLIWRAINELANKGMPCDAVTL GDWFESNGLAEMVGGAGYLIELANSTPSAANIAAYAEIVREKSVLRQLIDAGTSITEDGYRPEGKSVHEVLESAEQRVFH IAESGARGKKDSVSMREAVKDAFRLLTERYENRGQLTGVSTGFTDLDRLTSGLQPSDLIIVAARPSMGKTAFALNIAEAA ALGGKKAVVVFSMEMSSSQLAFRLISSVGRIHQQHLRNGDLQEEDWPRVSNAIALLSEAKIFIDDTPGLSPVELRSRARR LHREHGGLGLIVIDYLQLMQVPGNKENRATEISEISRSLKGLAKELNVPVIALSQLNRSLEQRADKRPMMSDLRESGAIE QDADVIMFIYRDEYYNKESPDKGVAEIIIGKQRNGPTDTCKLTFLGHYTQFVNYASDSFVGSFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-91 | 51 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-85 | 50 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-85 | 50 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-80 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-80 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-80 | 49 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-83 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-76 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-64 | 42 |
