Gene Information

Name : sem (SAI4T8_1013430)
Accession : YP_007581917.1
Strain : Staphylococcus aureus ST228 (isolate=16035)
Genome accession: NC_020533
Putative virulence/resistance : Virulence
Product : Enterotoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1858177 - 1858896 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAGAATACTTATCATTGTTGTTTTATTGTTTTGCTATTCGCAAAATCATATCGCAACCGCTGATGTCGGAGTTTT
GAATCTTAGGAACTATTATGGTAGCTATCCAATTGAAGACCACCAAAGTATTAATCCTGAAAATAATCATCTTTCGCATC
AATTAGTTTTTTCTATGGATAATTCGACAGTAACAGCTGAATTTAAGAACGTTGATGATGTAAAGAAATTCAAAAATCAT
GCTGTAGATGTATATGGTCTAAGTTATAGTGGATATTGTTTGAAAAACAAATATATATACGGTGGAGTTACATTAGCAGG
TGATTATTTAGAGAAATCTAGACGTATTCCTATTAATCTTTGGGTTAATGGAGAACATCAAACTATATCTACTGACAAAG
TATCAACTAATAAAAAGTTAGTAACAGCTCAAGAAATTGATACTAAATTAAGAAGATATCTACAAGAAGAATATAATATT
TATGGCTTTAATGATACAAATAAAGGAAGAAATTATGGTAATAAGTCAAAATTTAGTTCTGGATTTAATGCAGGAAAAAT
ATTATTTCATTTGAATGATGGTTCATCATTTTCTTATGACTTATTTGATACTGGAACAGGACAAGCTGAAAGTTTCTTAA
AAATATATAATGACAACAAAACTGTCGAAACTGAAAAATTCCATTTAGATGTAGAAATATCTTATAAGGACGAAAGTTGA

Protein sequence : 
MKRILIIVVLLFCYSQNHIATADVGVLNLRNYYGSYPIEDHQSINPENNHLSHQLVFSMDNSTVTAEFKNVDDVKKFKNH
AVDVYGLSYSGYCLKNKYIYGGVTLAGDYLEKSRRIPINLWVNGEHQTISTDKVSTNKKLVTAQEIDTKLRRYLQEEYNI
YGFNDTNKGRNYGNKSKFSSGFNAGKILFHLNDGSSFSYDLFDTGTGQAESFLKIYNDNKTVETEKFHLDVEISYKDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sem NP_372353.1 enterotoxin Virulence vSa¥â Protein 2e-107 100
sem NP_374936.1 enterotoxin SEM Virulence vSa¥â Protein 2e-107 100
SAMSHR1132_16750 YP_005326183.1 enterotoxin Virulence vSa¥â Protein 2e-102 95
sei YP_185758.1 enterotoxin type I Virulence vSa1 Protein 3e-64 62
seg2 NP_646754.1 enterotoxin SeG Virulence ¥ÕSa3 Protein 1e-64 62
seq AAL04146.1 Seq Virulence SaPI3 Protein 2e-64 62
entQ AAL67620.1 staphylococcal enterotoxin Q Virulence SaPI1 Protein 6e-64 62
seq YP_493501.1 enterotoxin Q Virulence SaPI5 Protein 1e-63 61
SAMSHR1132_16740 YP_005326182.1 enterotoxin sei Virulence vSa¥â Protein 3e-62 59
entK AAC28968.1 staphylococcal enterotoxin K Virulence SaPI1 Protein 4e-58 59
sei NP_372352.1 extracellular enterotoxin type I Virulence vSa¥â Protein 1e-61 58
sei NP_374935.1 extracellular enterotoxin type I Virulence vSa¥â Protein 1e-61 58
sek YP_493500.1 enterotoxin K Virulence SaPI5 Protein 7e-57 58
sek YP_185757.1 enterotoxin Virulence vSa1 Protein 2e-57 58
sek2 NP_646755.1 enterotoxin Sek Virulence ¥ÕSa3 Protein 2e-57 58
sek AAL04147.1 Sek Virulence SaPI3 Protein 2e-57 58
sel YP_415866.1 enterotoxin L Not tested SaPIbov Protein 1e-51 55
sel2 NP_645577.1 extracellular enterotoxin L Virulence vSa3 Protein 2e-51 55
sel AAG29598.1 sel Virulence SaPIbov Protein 8e-52 55
sel YP_005735947.1 staphylococcal enterotoxin L Virulence SaPI1 Protein 1e-51 55
unnamed AET14350.1 extracellular enterotoxin L Virulence SaPI68111 Protein 8e-52 55
sel NP_372532.1 extracellular enterotoxin L Virulence vSa4 Protein 1e-51 55
sel NP_375117.1 extracellular enterotoxin L Virulence vSa4 Protein 1e-51 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sem YP_007581917.1 Enterotoxin VFG1326 Protein 5e-65 62
sem YP_007581917.1 Enterotoxin VFG1327 Protein 1e-57 58