Gene Information

Name : hly (SAI3T3_1008260)
Accession : YP_007579437.1
Strain : Staphylococcus aureus ST228 (isolate=15532)
Genome accession: NC_020532
Putative virulence/resistance : Virulence
Product : Alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1119124 - 1120092 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence : 
ATGATGAAAATGAAAACACGTATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCCATATTAATGAATCCTGTCGC
TAATGCCGCAGATTCTGATATTAATATTAAAACCGGTACTACAGATATTGGAAGCAATACTACAGTAAAAACAGGTGATT
TAGTCACTTATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAA
CTGCTAGTTATTAGAACGAAAGGTACCATTGCTGGTCAATATAGAGTTTATAGCGAAGAAGGTGCTAACAAAAGTGGTTT
AGCCTGGCCTTCAGCCTTTAAGGTACAGTTGCAACTACCTGATAATGAAGTAGCTCAAATATCTGATTACTATCCAAGAA
ATTCGATTGATACAAAAGAGTATATGAGTACTTTAACTTATGGATTCAACGGTAATGTTACTGGTGATGATACAGGAAAA
ATTGGCGGCCTTATTGGTGCAAATGTTTCGATTGGTCATACACTGAAATATGTTCAACCTGATTTCAAAACAATTTTAGA
GAGCCCAACTGATAAAAAAGTAGGCTGGAAAGTGATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGATAGAG
ATTCTTGGAACCCGGTATATGGCAATCAACTTTTCATGAAAACTAGAAATGGTTCTATGAAAGCAGCAGAGAACTTCCTT
GATCCTAACAAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGACTTCGCTACAGTTATTACTATGGATAGAAAAGC
ATCCAAACAACAAACAAATATAGATGTAATATACGAACGAGTTCGTGATGACTACCAATTGCATTGGACTTCAACAAATT
GGAAAGGTACCAATACTAAAGATAAATGGACAGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATG
ACAAATTAA

Protein sequence : 
MMKMKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKK
LLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGK
IGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAAENFL
DPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEM
TN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 100
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 8e-147 100
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 100
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-144 99
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-144 99
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 6e-145 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hly YP_007579437.1 Alpha-hemolysin VFG1293 Protein 3e-145 99