|
Name : SAI1T1_2006510 (SAI1T1_2006510) Accession : YP_007577257.1 Strain : Staphylococcus aureus ST228 (isolate=10388) Genome accession: NC_020529 Putative virulence/resistance : Unknown Product : IS1181, transposase Function : - COG functional category : - COG ID : - EC number : - Position : 872520 - 873875 bp Length : 1356 bp Strand : + Note : - DNA sequence : GTGACCAAACCCAAACTAAAGGAGACAAGTGCGCCTATGTGTAATGATACCTTAGAATTACTAAGAATAAAAGATGAAAA TATAAAATATATAAACCAAGAAATTGACGTCATTATCAAAGGAAAAAAAGCAACAGTGGTTAATGCTGTACTAACGTATA AGCCTTCGGCCTGTTATTGTTGTGGAGTTAAAAATGAAGGACAAATTCATAAACATGGTAAGCGTGTTTCTCGTATTACT TTACTTAAAACTCAAGGGTATAACACATACCTCAACTTAGCTAAACAACGTTTTAAATGCTTAGAATGCAATGGCACTTT TACTGCTAAAACGTCAATTGTTGATGAGTCGTGTTTTATCTCAAGATGTGTTACTCAAAAAGTTATAGAAGAAGCTACTA AAGTTAAAACAGAGATTGATACTGCAGAAGATAACTGTATCTCTCCATCTACTGTAAGTCGTATTAGAACTAAAGCGGCT AATTCATTACGAATTAAACCGTTTAATTGTTTGCCAGAACACATCGCTATGGATGAATTTAAAAGCGTTAAAAATGTAAC TGGATCAATGAGTTTCATTTTTATAGATAATGATACTCATGATGTTATAGATATTTTAGAAAATAGAACTACAAGATTCT TGCGTGCCTATTTCGAGCGATTCGATTTAAAAAATCGACAACAAGTTAAGACGGTTACTATTGACATGTATGAACCCTAT GTCCGATTATTTCGCGACCTATTTCCTAATGCAGCTATTATTTTTGACAGATTCCATATCGTTCAACATTTAAATAGGGA ACTTAATAAGTATCGTGTACAAGTTATGAATGAATACCGTAATAAAAAAGGACCTAATTATACAATTTTTAAGAATAACT GGAAAGTTCTATTGATGGATACTAGTAAAACCATATTTAGTAAATACAGATGGAATAAATCTTTTAAGGCTTATAAACGC TCATCTGACATTGTAGAATTCATGCTTTCAAAAGACGATATACTACGACGCTCCTACGAACTTGTCCAAGGATTAAGAAA AGATCTAAGGTTATGTAATTGGCCTAAATTTATTAATCGTTTAAATTCAGTTAGTAAAAAGTCTGTGAGTAAAGGTGTAT GGAAAGTGGTTAAATATTATAGAAAACATCAAAGGATGTTAAGAAATACAATTTATTACCCAGCATTTAATAATGGTGCT ATAGAAGGAATTAATAATAAGATAAAATTAATCAAGCGAATTTCTTTTGGTTACAGAAATTTCAACAACTTTAAAGCACG TATAATGATGATTTTCAGCTTATACAAAGGAGAAAAAAAGAAGACAACCAAGCCCAATAATGGACTGGCCGCCTAA Protein sequence : MTKPKLKETSAPMCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKHGKRVSRIT LLKTQGYNTYLNLAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAA NSLRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPY VRLFRDLFPNAAIIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKR SSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGA IEGINNKIKLIKRISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 0.0 | 100 |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 0.0 | 100 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 0.0 | 99 |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 8e-79 | 44 |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 6e-79 | 44 |
