Gene Information

Name : ccrA1 (SAI1T1_2000330)
Accession : YP_007576656.1
Strain : Staphylococcus aureus ST228 (isolate=10388)
Genome accession: NC_020529
Putative virulence/resistance : Unknown
Product : Cassette chromosome recombinase A1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47008 - 48357 bp
Length : 1350 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAAGCAATAGGTTACTTACGACAGAGCACTACAAAGCAACAATCCTTAGCAGCACAAAAACAAACCATCGAGGC
ATTAGCCAAAAAACATAATATTCAATACATTACCTTTTATAGCGATAAGCAATCAGGACGCACTGATAAGCGGAACGGTT
ACCAACAAATTACTGAACTGATTCAACAAGGACAATGTGATGTATTATGTTGTTACAGATTAAACCGACTTCATCGCAAT
CTTAAAAATGCATTAAAACTCATGAAATTGTGTCAAAAATACCATGTCCATATCTTAAGCGTTCATGATGGCTATTTTGA
TATGGATAAAGCATTCGATCGGCTCAAACTCAATATTTTCATCAGCTTGGCCGAACTAGAATCTGATAATATAGGCGAAC
AAGTCAAAAATGGAATCAAAGAAAAAGCGAAACAAGGTAAAATGATTACAACACATGCACCCTTTGGGTATCACTATCAT
AATGGTACTTTCACGATAGACACAGTAAAAGCACCAACAGTAAAAGCTGTGTTCAATTATTACCTTCAAGGTTATGGTTA
TAAAAAAATTGCGCAATACTTAGAAGCTGATGATAAATTCATTAATCGTAAGCCCTATCAAGTGCGTAATATTATCCTTA
ACCCTAATTACTGTGGCCGTGTTATCAATCAATACGGACAATATGAAAACATGTTCCCAGCTATTGTCAGTACAACGATA
TACGAAGAAGCTCAAGTTACCCGAACTCAGAAACCAGTAAAACGTAAGCCGTCAGAAAACCAACTCAAACAAAAAATCAA
ATGTCCTTATTGTGATTCAACACTAACTAATATGACCATTAGAAAAAAGCACCATACATTACGTTATTATGTTTGTCCTC
AAAATATGAATGCATCTCGTTTTGTCTGTGAATTCAAAGGGATCAACGCACAAGAATTAGAAACAAGTGTTTTAGCGACT
TGTCAGGACTTCTTTCAAAATCAACAGCTCTATTCAAAAATAAACCATACTATTCAACAACGACTCAAAAGACAAAGAGA
TATAGAAACTAAAACTACACTCAATCACGAGCAGCTGATAGAAAAATTAGCCCAAGACAAAATTGATGCAGAAACGTTCA
GAGAACAAACGCAATCATTACGTCAGCAATCAAAACCTATATCATCAATCAGTACGTATCAAATTCGAAAAGCTTTCCAA
AACATCATTCAACAACGTTTCACGCTAAACATGTTGTACCCCTATATTGATGAAATTAATATTTCTAAAAATAAAAGCCT
CGCTGGCATCTATTTCAAAAATGAACCACTGAATATTGTAAAGCAGACTATGGAATTATCAATTGTATAA

Protein sequence :
MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITELIQQGQCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIFISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYH
NGTFTIDTVKAPTVKAVFNYYLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI
YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASRFVCEFKGINAQELETSVLAT
CQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLIEKLAQDKIDAETFREQTQSLRQQSKPISSISTYQIRKAFQ
NIIQQRFTLNMLYPYIDEINISKNKSLAGIYFKNEPLNIVKQTMELSIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccrA1 YP_184952.1 cassette chromosome recombinase A1 Not tested Type-I SCCmec Protein 0.0 100
ccrA1 BAA86648.1 cassette chromosome recombinase A1 Not tested Type-I SCCmec Protein 0.0 100
ccrA1 BAB83486.1 site-specific recombinase Not tested SCC 12263 Protein 0.0 99
ccrA1 YP_042166.1 site-specific recombinase Not tested SCC476 Protein 0.0 95
SSP0036 YP_300126.1 cassette chromosome recombinase A Not tested SCC15305RM Protein 0.0 90
ccrA1 YP_005754052.1 site-specific recombinase CcrA1 Not tested Type-XI SCCmec Protein 0.0 84
ccrA3 BAB47596.1 cassette chromosome recombinase A3 Not tested Type-III SCCmec Protein 4e-172 79
ccrA3 BAB46971.1 cassette chromosome recombinase A3 Not tested Type-IIIinv SCCmec Protein 4e-172 79
ccrA NP_644854.1 cassette chromosome recombinase A Not tested Type-IV SCCmec Protein 7e-173 77
SE0037 NP_763592.1 cassette chromosome recombinase A Not tested SCCpbp4 Protein 7e-173 76
SAMSHR1132_00410 YP_005324564.1 site-specific recombinase Not tested Type-IIIinv SCCmec Protein 1e-168 76
ccrA YP_492758.1 cassette chromosome recombinase A Not tested Type-IV SCCmec Protein 1e-168 76
ccrA BAB72127.1 cassette chromosome recombinase A Not tested Type-IVb SCCmec Protein 1e-172 76
ccrA YP_039531.1 site-specific recombinase Not tested Type-II SCCmec Protein 2e-171 76
ccrA2 DAA01834.1 cassette chromosome recombinase A type 2 Not tested SCCpbp4 Protein 5e-173 76
SERP2498 YP_190040.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 2e-171 76
ccrA2 BAC67560.1 cassette chromosome recombinase A2 Not tested Type-IVc SCCmec Protein 1e-168 76
ccrA BAB72108.1 cassette chromosome recombinase A Not tested Type-IVa SCCmec Protein 2e-171 75
ccrA BAA82194.1 site-specific recombinase Not tested Type-II SCCmec Protein 2e-172 75
ccrA NP_370586.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 2e-172 75
ccrA NP_373298.1 cassette chromosome recombinase A Not tested Type-II SCCmec Protein 2e-172 75
SE0057 NP_763612.1 cassette chromosome recombinase A Not tested SCCpbp4 Protein 2e-120 55
ccrA4 DAA01836.1 cassette chromosome recombinase A type 4 Not tested SCCpbp4 Protein 2e-120 55