Gene Information

Name : SM2011_c03282 (SM2011_c03282)
Accession : YP_007576409.1
Strain : Sinorhizobium meliloti 2011
Genome accession: NC_020528
Putative virulence/resistance : Unknown
Product : Putative transposase number 1 for insertion sequence ISRm27
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3399086 - 3400600 bp
Length : 1515 bp
Strand : -
Note : corresponds to SMc03282

DNA sequence :
GTGCCGGGTCGCCATGTAACCGATCATCAGATGAGATTATTCATGAAGTATCGACAAACGCATTCTGTTGAGGTCGCCGC
CGCGAAGGCGTCGATCAGCCGGGCGACGGCATTCCGCATCGAGAAAGAGCAGCGCCTTCCGTCGCAGAACAAGCCGCCGC
GCGGTCGGCGTCGCCCCGATCCGCTTGAGCATATCTTTGATGCGGAGGTTGTTCCGCTTCTCAAGGCCGCTCCCGGCATT
CGTGCGGTCGCCGTTTACGACGAGATGCTGCGACGTCATCCGGAACTGCCCGAAGGCATTCGCCGCACACTTGAGCGGCG
CATTCGGTCCTGGCGGGCCGTTCACGGTGAGGCACAGGAGGTGATCTTTCGCCAGACGCACGAACCCGGCCGGTTGGGGC
TGTCGGATTTTACCGACATGGGCAGCCTCAGCGTGACGATCGCCGGCCAGCCGCTCGACCATCTGCTTTATCACTTCCGG
CTGGTTTGGTCGGGCTTCGAACACGCCCATGTCATCCTTGGCGGCGAAAGCTTCGTCGCCTTGGCGGAGGGCCTGCAGAA
CGCCCTGTGGTCGGTCGGCGGTTCGCCGCTCTATCACCGCAGCGACAGCCTGTCGGCCGCCTTCCGCAACCTCGATGCCG
ATGCCAAGGTCGATCTCACCAACCGCTATGAGGACCTGTGCGCTCATTACCGGATGACGCCAACCCGTAACAACAAGGGC
ATCGCCCACGAGAACGGTTCGATCGAAAGTTCCCACGGCCATCTCAAGAACGCCGTCCGCGATGCACTCCTGATGCGCGG
CACCCGAGACTTCAACGATCTCCGCTCCTACCGCGCCTTCATCGACGAGATCGTCAGCCGCCGCAATGCCGCGCATGGCA
AGCGCATCGATGCCGAGCGCCCGCATCTGCAGGCACTTCCCGCTCGCCGCACCACCCACTTCGAGGAGGTGGTCGTCACC
GTGTCGCGCACCGGCGGCTTCGCCTTGCGCAAGGTCTTCTACACCGTCCCCTCCCGTTTGATCGGCCACCGGCTGCGTGT
GCGTTTGTTCGACGATCGCCTCGACGTCTTCATCGGCGGCACGCATCTGCTGACGTTGCCGCGAGGTCGCGCCCATGCGA
GCGGCAAGCACGATCAGGTCGTCAACTATCACCACGTCATTCATTCCCTGCGCAAAAAGCCGATGGCGCTTCTCAACCTG
GTCTATCGCGACAAGCTCTTCCCTCGGCCGGAATACCGAAGGGCTTTCGACACTCTCATCGAGCAACTGCCTGACCGGCA
GGCTTGCAAGGTCACCGTCGAACTGCTGGCCCTGGCTCATGATCGCGGATGCGAGCGTGAACTGGCCGAGGAGCTTGCCA
GAACGCTCGACGCCCGCAAACTGCCCGACCTGATGGCCTTGAGAGCCATCTTCGGCCCGGACCCGGATCAGTTGCCGACC
GTTCATGTGCAACTCGCATCGCTCAATAGCTATGAAGCCCTGATGGGGTCTGCCTATGCTGGAGAGGCCGCATGA

Protein sequence :
MPGRHVTDHQMRLFMKYRQTHSVEVAAAKASISRATAFRIEKEQRLPSQNKPPRGRRRPDPLEHIFDAEVVPLLKAAPGI
RAVAVYDEMLRRHPELPEGIRRTLERRIRSWRAVHGEAQEVIFRQTHEPGRLGLSDFTDMGSLSVTIAGQPLDHLLYHFR
LVWSGFEHAHVILGGESFVALAEGLQNALWSVGGSPLYHRSDSLSAAFRNLDADAKVDLTNRYEDLCAHYRMTPTRNNKG
IAHENGSIESSHGHLKNAVRDALLMRGTRDFNDLRSYRAFIDEIVSRRNAAHGKRIDAERPHLQALPARRTTHFEEVVVT
VSRTGGFALRKVFYTVPSRLIGHRLRVRLFDDRLDVFIGGTHLLTLPRGRAHASGKHDQVVNYHHVIHSLRKKPMALLNL
VYRDKLFPRPEYRRAFDTLIEQLPDRQACKVTVELLALAHDRGCERELAEELARTLDARKLPDLMALRAIFGPDPDQLPT
VHVQLASLNSYEALMGSAYAGEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 1e-77 42
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 1e-77 42
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 9e-78 42
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-77 42
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-77 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM2011_c03282 YP_007576409.1 Putative transposase number 1 for insertion sequence ISRm27 VFG1728 Protein 6e-78 42