Gene Information

Name : SM2011_c03279 (SM2011_c03279)
Accession : YP_007576406.1
Strain : Sinorhizobium meliloti 2011
Genome accession: NC_020528
Putative virulence/resistance : Unknown
Product : Putative transposase number 2 for insertion sequence ISRm28
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3397331 - 3397687 bp
Length : 357 bp
Strand : +
Note : corresponds to SMc03279

DNA sequence :
GTGATCGGACTTTCGCCGAATGGCGTGAAGATCATGGTGGCGACGCAGCCTGTCGACTTCCGGCGCGGCATGAATGGCCT
TGTTGCGCTGGTGGCGTCAGCGCCTTCGGCTGATCCCTACTGTGGTGACGTGTTTGTGTTCCGCGCCAAGCGGTGCGATC
GCCTGCGCTGCATTTATTGGGACGGGTCCGGCATGATCCTAGCGACGAAGTGGCTTGAGGCGGGCAAGTTCGTTTGGCCA
CCGATCCGCGATGGCGCGATGCAGATGAGTAGCCAAGAGTTCTCGCTTTTGCTGGCCGGTATCGACTGGACTCGGGTTAA
ACGGAACCTCGTAAAGCGGCCGACGAAAGTGGGCTGA

Protein sequence :
MIGLSPNGVKIMVATQPVDFRRGMNGLVALVASAPSADPYCGDVFVFRAKRCDRLRCIYWDGSGMILATKWLEAGKFVWP
PIRDGAMQMSSQEFSLLLAGIDWTRVKRNLVKRPTKVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 1e-08 44
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 8e-19 44
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-14 42
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-14 42
unnamed AAC31493.1 L0014 Not tested LEE Protein 4e-15 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-15 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 4e-15 42
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 5e-15 42
unnamed AAL99258.1 unknown Not tested LEE Protein 4e-15 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 5e-15 42
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 4e-15 42
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 5e-15 42
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-15 41
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-15 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 1e-17 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM2011_c03279 YP_007576406.1 Putative transposase number 2 for insertion sequence ISRm28 VFG1517 Protein 5e-09 44
SM2011_c03279 YP_007576406.1 Putative transposase number 2 for insertion sequence ISRm28 VFG1709 Protein 1e-15 42
SM2011_c03279 YP_007576406.1 Putative transposase number 2 for insertion sequence ISRm28 VFG0792 Protein 1e-15 42
SM2011_c03279 YP_007576406.1 Putative transposase number 2 for insertion sequence ISRm28 VFG1698 Protein 1e-15 41