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Name : lysS (SM2011_c03173) Accession : YP_007576178.1 Strain : Sinorhizobium meliloti 2011 Genome accession: NC_020528 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3134126 - 3135622 bp Length : 1497 bp Strand : + Note : corresponds to SMc03173 DNA sequence : ATGACCGACAAGACACAGGCAGCCGGCCTCTCCTCCGACGCGACGGAAGTGCGCTCCCAGAAGCTCGACCTGCTGCGCCA GCAGATCGGCGACGTCTATCCCGCGCATTTCCACCGTACGCTCACCAATGCGGAACTCGCGGAGAAATATGCCGGGCTGG AGCCCGATACCGAAAGCGGCGAAACGGTAACCGTTGCCGGCCGCGTTTTCTCCTCGCGCAATTCCGGCATGTTCATGGAT CTTCATGACGCCTCCGGCAAGATCCAGATCTTTTCGCACAAGGATACGGCACCGGAAGAGGCGCGCGCGCTTCTGCCGAT GATCGATCTCGGCGACATCATCGGGGTCACCGGAGAGGTGCGCCGCACCAAGCGCGGCGAACTGACCGTCAACGCCAAAG AGATCACCATGCTCTGCAAGTCGCTCCTGCCGATGCCGGAGAAGTATCACGGGCTTGCCGATATCGAGACGCGCTACCGC AAGCGCTACCTCGACATCATGGTCAACGAGGAATCGAAGCTGCGCTTCCAGCAGCGAAGCCGCATCGTGTCGAGCCTGCG CCGATTCCTCGAGGACGAAGGCTTCATGGAAGTGGAGACGCCGATGCTGCAGCCGATCTACGGCGGCGCGACGGCCGAGC CCTTCAAGACGCATCACAACACGCTGAAGCTCGACATGTATCTGCGCATCGCGCCCGAGCTTTACCTGAAGCGCATTCTC GTTTCCGGCCTGACGGACAAGGTCTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCGACCCGGCACAATCCTGA ATTCACCATGATGGAGTGCTACTGGGCCTATGCTGACTACGAGGACGTGATGGGTCTCGTGGAGCGCATGTTCGAGACCC TGGCGCTTGCGGTTCACGGCAAGACGGAATTCGAGTTCGGCGACAAGCAGCTCTCCTTCAAGGGGCCGTTCCCGCGCGTC TCTATGCCGGCGGCCGTCAAGGACGCGACCGGAATCGATTTCCTTGCCCTCAAGAGCGACGAGGAGGCCCGGCAGGCGGC TCGCGACGCCGGTGTCGAGATCGAGAAGGACGCGACCTGGGGCGAAGTGCTCGCCTTCCTCTTCGAGGAGAAGGTCGAAG CGACCTTGATCCAGCCTGCTCATGTCATCCACTTCCCGAAGGACATCTCGCCCTTCGCCAAGGAGGTGCCGGGCGAGCCG CGGCTCGTCGAGCGCTTCGAGACCTATTGCAACGGCTGGGAGATCGGCAACGCCTTTTCCGAGCTCAACGACCCGGTCGA GCAGCGCGCCCGCATGGTCGAGCAGATGGAACAGGCGCATGCCCGCGGCGAGAAGGAAAAGACGCTGGACGAGGACTTCC TCGATGCCATGGACCAGGGCATGCCGCCCGCCGGGGGGTTGGGGATCGGTGTCGACCGGCTGATCATGCTGCTCACCAAC TCGCCGTCGATCCGCGACATCATCCTCTTCCCGGCCCGCCGCCAGAAGGCCGATTGA Protein sequence : MTDKTQAAGLSSDATEVRSQKLDLLRQQIGDVYPAHFHRTLTNAELAEKYAGLEPDTESGETVTVAGRVFSSRNSGMFMD LHDASGKIQIFSHKDTAPEEARALLPMIDLGDIIGVTGEVRRTKRGELTVNAKEITMLCKSLLPMPEKYHGLADIETRYR KRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRIL VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPFPRV SMPAAVKDATGIDFLALKSDEEARQAARDAGVEIEKDATWGEVLAFLFEEKVEATLIQPAHVIHFPKDISPFAKEVPGEP RLVERFETYCNGWEIGNAFSELNDPVEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTN SPSIRDIILFPARRQKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-103 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007576178.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 1e-103 | 47 |
