|
Name : SM2011_c02027 (SM2011_c02027) Accession : YP_007575816.1 Strain : Sinorhizobium meliloti 2011 Genome accession: NC_020528 Putative virulence/resistance : Unknown Product : Dipeptide ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2730719 - 2732347 bp Length : 1629 bp Strand : - Note : corresponds to SMc02027 DNA sequence : ATGACGATGGACAAGCTTCTCACCGTTTGCGGCCTTTCGCTTGAAGTCGCAAGAACCGGCCAGCAGGTCGTCAAGTCGGT CTCCTTCGACCTGGCGCCGGGCGAGATCTTCGGCATCGTCGGCGAAAGCGGCTCCGGCAAGACGCTGGCGACCCGAGCGC TGATCTCGCTGCTGCCGCCGACCATCAAGGTCGCTGACGGGTCGGTGTCCTACAAGGGCCGCGACGTGCTGAAGATGAAG GAAAATGAGCTTCGCCATCTGCGCGGCGCAGAGATCGGCGTCGTCTTCCAGGAGCCGATGACCTCACTCAACCCGTCGAT GACGATCGGCCGGCAGCTGGAGGAAGGACTCATCCTGCACACCAAGGCCTCGGCGCAGGAGCGACGCTCCCTCATACTCG ACATGTTGAAGCGGGTCGGCATCCGTGATCCGGAGGGCGCGCTTTCCTCCTATCCGCACGAGTTTTCGGGCGGCATGCGC CAGCGCATCATGCTTGCCTCCGTCATGCTTTTGAAGCCGGCGCTGCTGATCGCCGATGAGCCGACCACGGCACTCGATGC CGTCATCCAGCGCGACGTGATGGAACTGATGGTGGAACTGACGCGGGCGGAAGGTACGGCCATTTTGCTGATCAGCCACG ATCTTCCGATGGTGGCGCGCTACACGAGCCGTATCGTCGTGATGGAAAAGGGCGCGATCGTGGAAAAGGGCCGGACCGAG GACCTGCTCAAGGCACCGCAGCATCCTTACACGAAGAAGCTCCTCTCCTCGCTGCCCTTCCGCGGCCGGCCGCGCCAGAT CGATCTGACGAGCGTGCCCATGATCTCGGCCCGCGATATCATCGTGGACTATGCAGGCCGAAAGTCGCTGTTCAGGAAGA ACAAGCCGAAGCGCGCGCTGCATGGCGTCAGCATCGACATTCACGAGGGCGAGGTCGTGGCACTCGTCGGCGGTTCCGGC TCCGGCAAGACGACGCTCGGCCGCACCATTGCCGGTCTCGTCACGGAAAGCGAGGGCCGCATCCAGTTCCAGGGACGGCC GCGCACTGAAAACTGGACCGATTATCGCCTCAACTGCCAGATGGTGTTCCAGGATCCTTATTCATCGCTCGATCCGCGCA TGACCATCGAGGCGCTGGTCGAAGAGGCGCTGAGGCCGGTGCCGGGCCTGGATGGCAAGGCCAAGCGCAAGCGTACCCTG GAAACGCTGGAGGAAGTCGGGCTCGGGGTCGACTATGCCGGCCGTTATCCGCACGAACTCTCCGGAGGCCAACGCCAGCG CGTCGCCATTGCGCGTGCGATCGCGAGACGCCCGCGATTCCTGATCGCGGACGAACCGGTTTCCGCGCTCGACGTGACGG TCAGGGCGCAGGTCCTCGATCTCTTCTCGGATCTGCAGAAACGCTACGGCTTTTCGTGCCTGTTCATCAGTCACGACCTC GGCGTCGTCGAACAGGTGGCCGACCGCGTCGTCGTCATGCAGGACGGCCGGATCATCGAGGAGGGTGACCGCGACACGAT TTTCGACAGTCCGAAGGAAGCCTATACGCGCCGGCTTCTCTCGGCCATTCCCGCCCTCGACCAGAACGAAAAGGGCGGCG TGACACTCAAATGGCGTCTGGAGAATTGA Protein sequence : MTMDKLLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMK ENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMR QRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTE DLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSG SGKTTLGRTIAGLVTESEGRIQFQGRPRTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTL ETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDL GVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALDQNEKGGVTLKWRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
