|
Name : kdsB (SM2011_c02898) Accession : YP_007573488.1 Strain : Sinorhizobium meliloti 2011 Genome accession: NC_020528 Putative virulence/resistance : Virulence Product : putative 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 255205 - 255957 bp Length : 753 bp Strand : + Note : corresponds to SMc02898 DNA sequence : ATGAATCGTGAACAATCGGGCAAAACCCTCGTACTCATTCCGGCGCGCATGGCGTCGACGCGCCTTCCCGGCAAGCCGCT TGCCGATATTTGCGGCCTGCCGATGATCGTGCAGGTGGCAAGGCGGGCGGCGGAAGCCGAGGTCGGGCGGATCGTGGTGG CGGTCGATCATCCCGATGTCTTCGCGGCCGTGACCGGCGCCGGCTTCGAGGCGATCATGACGCGTGTCGATCACCAGTCC GGCTCCGACCGGATTCACGAGGCGCTCCTGAAGGCCGATCCGCATGGCGAAGCGGAAATCGTCATCAACGTGCAGGGCGA TCTTCCGACCATCGAGCCCGGTCCGATTCGTGCCGCGCTGAAGCCGCTGGAAAATCCCGCGACCGACATCGCCACACTGA CCGTGGCGATCACCGACGAACACGAAAAGACCAATCCCAACGTCGTCAAGGTCGTCGGCTCCCCGCTTTCCGACAGCCGC TTTCGCGCGCTCTATTTCACCCGCGCCACCGCGCCCTATGGCGAAGGGCCCCTCTATCACCACATCGGGCTTTATGCCTA TCGTCGCAAGGCGCTGGAGACTTTCGTTTCGCTGAAGCCGTCGACGCTCGAGAAGCGCGAATCGCTGGAGCAATTGCGGG CGCTCGAAGCGGGCATGCGCATCGATGTCGAGGTCGTGGACTCAGTGCCGCTCGGGGTCGACACGCCGGCCGATCTCGAC AAGGCCCGCCGCATCCTTTCCGCCCGCGTCTGA Protein sequence : MNREQSGKTLVLIPARMASTRLPGKPLADICGLPMIVQVARRAAEAEVGRIVVAVDHPDVFAAVTGAGFEAIMTRVDHQS GSDRIHEALLKADPHGEAEIVINVQGDLPTIEPGPIRAALKPLENPATDIATLTVAITDEHEKTNPNVVKVVGSPLSDSR FRALYFTRATAPYGEGPLYHHIGLYAYRRKALETFVSLKPSTLEKRESLEQLRALEAGMRIDVEVVDSVPLGVDTPADLD KARRILSARV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 9e-30 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 7e-29 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 9e-29 | 45 |
