Gene Information

Name : nagA (SM2011_c02878)
Accession : YP_007573467.1
Strain : Sinorhizobium meliloti 2011
Genome accession: NC_020528
Putative virulence/resistance : Virulence
Product : putative N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.25
Position : 234090 - 235250 bp
Length : 1161 bp
Strand : +
Note : corresponds to SMc02878

DNA sequence : 
ATGACTGCGAAGAAGACGATCAGCGGAGCGCGGATTTTCGACGGCATCGACTGGCACGACGGGGCAGCCCTCGTGATCGA
GGCAGGACACGTCAAGGCGATTGCGCCGGCGGGAAGCGTCCCCGCCGGTGGCGAGACCATCGACGCGCGTGGCCTGCTTC
TCGTGCCCGGCTTCATCGATCTGCAGGTGAACGGCGGCGGCGGCGCGCTTCTGAACGAAAAGCCGTCCCTCGAAAGTATC
CGGCAGATCTGCGCGGCGCATGCGCAATTCGGCACGACGGCGCTGCTGCCGACGCTGATCACCGACACGCGCGCGGTCAG
GACCGCGGCCATCGCCGCAGGCATCGAGGCGAAAGCCGCGGCGGTTCCCGGCTTCCTAGGCCTGCATCTCGAAGGCCCGC
ATCTTTCCGTCGCGCGCAAGGGGGCTCACGATCCGGCGCTGATCCGTCCGATGGGCGATGACGATCTTGCCGAGATACTC
GCCTGCGCAAAGGCGCTCAGCCGTCTGATGCTCACCGTGGCCCCGGAAAACGCCACCAAGGAGCAGGTGCGGGCGCTGGC
CGATGCCGGCGTCGTGGTGAGCCTCGGCCATACCGACGTGGATTACGACACCGCCTGCGCCTATGCCAAAGCGGGTGCCC
GGACCGTCACGCATCTCTTCAACGCCATGAGCGGACTCGGCCATCGCGAGCCTGGCGTGGTCGGCGCGGCGCTTTCGACC
GGCACGCTCCACGCCGGCATGATCGCCGACGGTTTTCACGTTCACCCGGCCTCGATGGGCATCGCGCTGCGCGGCAAGAA
AGGCCCGGGACAGATCTTTCTGGTCACCGACGCCATGTCGCCGATCGGCACCGATCAGACGAGCTTCTTCCTGAACGGAC
GGGAAATCCTGCGCCAGGGCGGGCGCCTGACGCTTGCCGACGGCACGCTTGCCGGCGCCGATGTCGACATGCTTTCGTCT
GTCCGCTTCGTCCACCAAAAGCTTGGCCTGCCGATCGAGGAGGCGGTCCGCATGGCCTCCGCCTATCCCGCCGACGCCAT
GGGGATCGCCTCGCACAAGGGCCGGCTCCTGCCGGGTACGGATGCGGATTTCGTGCTGCTCACGCCGGAACTCGCAATGA
AATCGACCTGGATCGGCGGGGAGACGGTTTTTGCGGCTTGA

Protein sequence : 
MTAKKTISGARIFDGIDWHDGAALVIEAGHVKAIAPAGSVPAGGETIDARGLLLVPGFIDLQVNGGGGALLNEKPSLESI
RQICAAHAQFGTTALLPTLITDTRAVRTAAIAAGIEAKAAAVPGFLGLHLEGPHLSVARKGAHDPALIRPMGDDDLAEIL
ACAKALSRLMLTVAPENATKEQVRALADAGVVVSLGHTDVDYDTACAYAKAGARTVTHLFNAMSGLGHREPGVVGAALST
GTLHAGMIADGFHVHPASMGIALRGKKGPGQIFLVTDAMSPIGTDQTSFFLNGREILRQGGRLTLADGTLAGADVDMLSS
VRFVHQKLGLPIEEAVRMASAYPADAMGIASHKGRLLPGTDADFVLLTPELAMKSTWIGGETVFAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 6e-45 41
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-44 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA YP_007573467.1 putative N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 5e-45 41