Name : SM2011_c04288 (SM2011_c04288) Accession : YP_007575221.1 Strain : Sinorhizobium meliloti 2011 Genome accession: NC_020528 Putative virulence/resistance : Unknown Product : Putative peptide transport ATP-binding ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 2107673 - 2109454 bp Length : 1782 bp Strand : - Note : corresponds to SMc04288 DNA sequence : ATGACTTCCTCTCTGCTTTCCGTGAAGGATCTGACCGTCCAGGTGGCTACGCCGACCGGGCCGAAGGTCGTGGTGGAGCG TCTGTCCTTCGATCTTCTTCCCGGCAGGACGCTTTGTCTTGCAGGCGAGAGCGGATCGGGTAAATCGATGACCGCGCTTT CGCTGATGCAGTTGCTGCCGAAGCCGATGGCACGAATTGCGGGCGGCTCGGCCACTCTCGATGGCGAGGACATATTGGCG CTTCCGGAAGCACGCATGCGGCGGATTCGCGGGCGCAAGATCGGGATGATCTTCCAGGAGCCGATGACCTCGCTCAATCC GGTGATGACGGTCGGAAATCAGCTGATCGGGGCGATCACCGCCCACGGAAACACCAGTGGCCGGCGCGCCGCGCGGGCGC GGGCCGCCGAACTCCTGGACCAGGTTCAGATTCCGGAGCCGGAGCGGCGGCTCGGCCAATATCCGCACGAGCTCTCCGGC GGCTTGCGTCAGCGAATCGTCATCGCGATGGCGCTCGCGCAAAACCCGAAAATCCTGATCGCCGACGAGCCGACGACGGC GCTCGACGTAACGGTTCAGGCGCAGATCCTGGCCCTTATCCGCAAGCTGCAGGCCGATCACGGGATTTCGGTGATCATGA TCACCCATGACATGGGCGTGGTCGCGGAAATGGCCGACGAGGTGCTGGTGATGAAGCATGGCCGTACCGTGGAGCACGCA ACCAGCAGGGATCTTTTCGCGCATCCGCAGGATGCGTACACGAAGGAGCTCCTATCCGCCGTGCCGCGCCTTGGCGAAAT GGCGGGAACGGAGACGCCGAAGCGTGCAGCGGGGAAGGCGGTCGAGGCAGGATCTGAGCCAGGCGCCGAACAGCCGATGC TCCAGGTCGAGAACCTCACGGTTCGTTTCGACATAAAGGGCGGCATCCTTCAGCGCCCGGTCAGGCGACTTCACGCGGTG GAGGGCATCTCTTTGTCCGTGCGCAGGGGTGAGACGCTGTCTCTCGTCGGAGAGTCCGGTTGCGGCAAGTCGACGACCGG CAAGGCGCTCTTGAACCTTGTCCCGTGGACGGGAGACATACGCGTCGACGGACGCTCCACGCGCGGCTTGCGAGGGAGCA CGATGCGGCCCATCCTGCGTGACGTCCAGATGATCTTCCAGGACCCTTACGCATCGCTGGATCCGCGTATGCGGGTCGGC GATCTGGTGGCCGAGCCACTTGTGATCCACGGCCTTGCAAGCGGAAGCGAGCTGCGTGACCGGGTGGAGTATCTTTTCAA GCGGGTCGGATTGTCGCCCGAGCAGATGAAGCGTTACCCGCATGAGTTTTCGGGCGGTCAGCGGCAGCGCATCTGTATCG CGCGCGCCCTGTCTCTCTCACCGAAGCTCATCGTCGCAGATGAGTCCGTCGCGGCACTCGACGTGTCGATCCAGGCACAG GTGCTCGATCTCCTGCAGGACATCCAGGACGAGACCGGCGTCTCCTACCTGTTTATTTCGCACGACATGGCGGTCGTCGA GCAGATCAGCCACCGGGTAGCGGTCATGTACATGGGCCGCTTCGTCGAAATGGGCACGCGGCGGCAGATCTTCGAGAGTC CGCAGCATCCCTATACGAAGAAACTGATGGCAGCCGTTCCCGTGGCCGATCCGGGCCGAGTACGCCGGGATTTCGTGCCG AAAGCGGAAGACCTGCCGAGTCCTGTGCGCGCCCTGGATTATGCGCCATCCTTCCCGCCGCCATCGGATCTGGGCGGCGG ACATCTCGTCTGGAACGGCTAA Protein sequence : MTSSLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMARIAGGSATLDGEDILA LPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSG GLRQRIVIAMALAQNPKILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHA TSRDLFAHPQDAYTKELLSAVPRLGEMAGTETPKRAAGKAVEAGSEPGAEQPMLQVENLTVRFDIKGGILQRPVRRLHAV EGISLSVRRGETLSLVGESGCGKSTTGKALLNLVPWTGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVG DLVAEPLVIHGLASGSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQAQ VLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESPQHPYTKKLMAAVPVADPGRVRRDFVP KAEDLPSPVRALDYAPSFPPPSDLGGGHLVWNG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-93 | 42 |
oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-70 | 41 |