Gene Information

Name : SM2011_c04288 (SM2011_c04288)
Accession : YP_007575221.1
Strain : Sinorhizobium meliloti 2011
Genome accession: NC_020528
Putative virulence/resistance : Unknown
Product : Putative peptide transport ATP-binding ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2107673 - 2109454 bp
Length : 1782 bp
Strand : -
Note : corresponds to SMc04288

DNA sequence :
ATGACTTCCTCTCTGCTTTCCGTGAAGGATCTGACCGTCCAGGTGGCTACGCCGACCGGGCCGAAGGTCGTGGTGGAGCG
TCTGTCCTTCGATCTTCTTCCCGGCAGGACGCTTTGTCTTGCAGGCGAGAGCGGATCGGGTAAATCGATGACCGCGCTTT
CGCTGATGCAGTTGCTGCCGAAGCCGATGGCACGAATTGCGGGCGGCTCGGCCACTCTCGATGGCGAGGACATATTGGCG
CTTCCGGAAGCACGCATGCGGCGGATTCGCGGGCGCAAGATCGGGATGATCTTCCAGGAGCCGATGACCTCGCTCAATCC
GGTGATGACGGTCGGAAATCAGCTGATCGGGGCGATCACCGCCCACGGAAACACCAGTGGCCGGCGCGCCGCGCGGGCGC
GGGCCGCCGAACTCCTGGACCAGGTTCAGATTCCGGAGCCGGAGCGGCGGCTCGGCCAATATCCGCACGAGCTCTCCGGC
GGCTTGCGTCAGCGAATCGTCATCGCGATGGCGCTCGCGCAAAACCCGAAAATCCTGATCGCCGACGAGCCGACGACGGC
GCTCGACGTAACGGTTCAGGCGCAGATCCTGGCCCTTATCCGCAAGCTGCAGGCCGATCACGGGATTTCGGTGATCATGA
TCACCCATGACATGGGCGTGGTCGCGGAAATGGCCGACGAGGTGCTGGTGATGAAGCATGGCCGTACCGTGGAGCACGCA
ACCAGCAGGGATCTTTTCGCGCATCCGCAGGATGCGTACACGAAGGAGCTCCTATCCGCCGTGCCGCGCCTTGGCGAAAT
GGCGGGAACGGAGACGCCGAAGCGTGCAGCGGGGAAGGCGGTCGAGGCAGGATCTGAGCCAGGCGCCGAACAGCCGATGC
TCCAGGTCGAGAACCTCACGGTTCGTTTCGACATAAAGGGCGGCATCCTTCAGCGCCCGGTCAGGCGACTTCACGCGGTG
GAGGGCATCTCTTTGTCCGTGCGCAGGGGTGAGACGCTGTCTCTCGTCGGAGAGTCCGGTTGCGGCAAGTCGACGACCGG
CAAGGCGCTCTTGAACCTTGTCCCGTGGACGGGAGACATACGCGTCGACGGACGCTCCACGCGCGGCTTGCGAGGGAGCA
CGATGCGGCCCATCCTGCGTGACGTCCAGATGATCTTCCAGGACCCTTACGCATCGCTGGATCCGCGTATGCGGGTCGGC
GATCTGGTGGCCGAGCCACTTGTGATCCACGGCCTTGCAAGCGGAAGCGAGCTGCGTGACCGGGTGGAGTATCTTTTCAA
GCGGGTCGGATTGTCGCCCGAGCAGATGAAGCGTTACCCGCATGAGTTTTCGGGCGGTCAGCGGCAGCGCATCTGTATCG
CGCGCGCCCTGTCTCTCTCACCGAAGCTCATCGTCGCAGATGAGTCCGTCGCGGCACTCGACGTGTCGATCCAGGCACAG
GTGCTCGATCTCCTGCAGGACATCCAGGACGAGACCGGCGTCTCCTACCTGTTTATTTCGCACGACATGGCGGTCGTCGA
GCAGATCAGCCACCGGGTAGCGGTCATGTACATGGGCCGCTTCGTCGAAATGGGCACGCGGCGGCAGATCTTCGAGAGTC
CGCAGCATCCCTATACGAAGAAACTGATGGCAGCCGTTCCCGTGGCCGATCCGGGCCGAGTACGCCGGGATTTCGTGCCG
AAAGCGGAAGACCTGCCGAGTCCTGTGCGCGCCCTGGATTATGCGCCATCCTTCCCGCCGCCATCGGATCTGGGCGGCGG
ACATCTCGTCTGGAACGGCTAA

Protein sequence :
MTSSLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMARIAGGSATLDGEDILA
LPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSG
GLRQRIVIAMALAQNPKILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHA
TSRDLFAHPQDAYTKELLSAVPRLGEMAGTETPKRAAGKAVEAGSEPGAEQPMLQVENLTVRFDIKGGILQRPVRRLHAV
EGISLSVRRGETLSLVGESGCGKSTTGKALLNLVPWTGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVG
DLVAEPLVIHGLASGSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQAQ
VLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESPQHPYTKKLMAAVPVADPGRVRRDFVP
KAEDLPSPVRALDYAPSFPPPSDLGGGHLVWNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-93 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-70 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-70 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-70 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-70 41