Gene Information

Name : SM2011_a1741 (SM2011_a1741)
Accession : YP_007572918.1
Strain :
Genome accession: NC_020527
Putative virulence/resistance : Virulence
Product : ABC transporter,ATP-binding protein,Fe3+-siderophore transport system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 983402 - 984244 bp
Length : 843 bp
Strand : -
Note : corresponds to SMa1741

DNA sequence : 
ATGACCGACCATCTGCTCGTCGCCAGCGGATTGACGGCCGGTTATGACAAAACCGAAATCCTGCATGCGCTCGACCTCAC
CATTCCCCCGCGCAAAATCACGGTGATCGTCGGCGCCAATGCCTGTGGCAAGTCCACGTTTCTCCGCACGCTCTCGCGGT
TAATCGCGCCCAGCAAGGGGCAAGTTCTCCTCGACGGCAAATCCATCCACCGGACACCCTCGCGAGATCTCGCCCGGACG
CTGGGTCTGTTGCCGCAATCGCCGATCGCGCCGGAAGGCATCACAGTGGTCGACCTCGTCAGCAGGGGACGGCATCCGCA
TCAAAGCCTGTTTTCCGGCTGGACGCGACGGGACGACGAGGCGGTCGACAGTGCGCTTAGGGCGACAAAGACATTCGACC
TTGCCGATCGGCCGATCGACGAGCTCTCCGGCGGCCAGCGGCAGCGGGTCTGGATCGCCATGGCACTCGCCCAGCAAACC
GACATCCTGCTGCTCGACGAGCCGACGACCTTTCTCGACATCAACCATCAGATCGAGGTGCTCGATCTCCTGACCGATCT
CAACAGCGCGCGTCGAACTACGGTCGTCATGGTGCTGCACGATCTCAACCTTGCTGCCCGCTACGCCGACCATCTCGTGG
CGATTGCCGGTGGGCGCGTGCACATTTCGGGCACTCCGGAAGAGGTGCTCACCGAAGAGACCGTGCGGCATGTTTTCGGC
CTTGATAGTCGCGTCATCAGCGATCCCACGTCGGGTCGGCCAATCATGCTACCGATCGGGCGACACCGGACGGCCGTCAT
CGACGACATGGGCGATGCACCACAAAAGGAGAGGAGCGCATGA

Protein sequence : 
MTDHLLVASGLTAGYDKTEILHALDLTIPPRKITVIVGANACGKSTFLRTLSRLIAPSKGQVLLDGKSIHRTPSRDLART
LGLLPQSPIAPEGITVVDLVSRGRHPHQSLFSGWTRRDDEAVDSALRATKTFDLADRPIDELSGGQRQRVWIAMALAQQT
DILLLDEPTTFLDINHQIEVLDLLTDLNSARRTTVVMVLHDLNLAARYADHLVAIAGGRVHISGTPEEVLTEETVRHVFG
LDSRVISDPTSGRPIMLPIGRHRTAVIDDMGDAPQKERSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-69 54
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-69 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-66 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-52 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-52 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM2011_a1741 YP_007572918.1 ABC transporter,ATP-binding protein,Fe3+-siderophore transport system BAC0164 Protein 6e-54 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM2011_a1741 YP_007572918.1 ABC transporter,ATP-binding protein,Fe3+-siderophore transport system VFG0925 Protein 3e-66 51
SM2011_a1741 YP_007572918.1 ABC transporter,ATP-binding protein,Fe3+-siderophore transport system VFG1042 Protein 6e-54 49