Gene Information

Name : virB4 (SM2011_a1315)
Accession : YP_007572669.1
Strain :
Genome accession: NC_020527
Putative virulence/resistance : Virulence
Product : VirB4 type IV secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 716800 - 719178 bp
Length : 2379 bp
Strand : -
Note : corresponds to SMa1315

DNA sequence :
TTGCCTAGCCTGACCACACTCAGATCTCGCGAACTCGGTCCGGAGACCTTCATCCCCTATGTCCGCCATGTCGACGAGTC
GACAATCGCGCTCGATTCCCGGGCGCTGATGGTGATGATCGCGCTCGAAGGCGTCTCCTTCGAGACCGCCGATATTCTCG
ACCTGAATGCCCTCCATCGCGACCTCAACACCCTCTACCGCAACATCGCCGACGAGCGGCTTGCCTTGTGGACGCATCTC
ATCCGCCGTCGCGACAACAGCTATCCGGAAGGCACGTTCGCCACACCGTTCTCGGCGGCGCTCAACGATAAGTACCGCGA
AAGAATGGTGGGCGAGGACCTGTTTCGCAACGACCTCTATCTGTCGATTCTCTGGTCACCAGCTCGCGATCCGGCAGACA
AGGCGGCAAAACTGCTGTCGCGCCTGCGTCGGGCCCGCCGGGTCGGGACCGAACTCGATGAGGGCGCCCTCAAGCATCTC
CGCGACAAGGTCATCGACGTCACCGCCGCTTTGAGACGCTTCGAGCCGCGCGTGTTGACCCTCTACGAGCACGACGGCCT
CATGTTCTCGGAACCGAGCGAGGTGCTCCATCAGCTCGTCGGCGGCCGTCGCGAGCCGATCCCGCTGACAGAGGGGCACA
TCGCTTCTGCCATCTACTCGGATCGCGTCATCGTGGGGCGCGAGACGATTGAGATCCGGCACGAGGCGGACAGCCGTTAT
GCCGGCATGCTGAGCTTCAAGGAGTATCCGGCCCGCACCAGGACCGGCATGCTTGACGCCGTGCTCACCAGCCCGTTTGA
ACTCATTCTGGCGCAATCCTTCTCTTTCGTCTCGAAGGCCGACGCGCGCATGATCATGGGCCGCAAGCAGAACCAGATGG
TCAGCAGCGGCGACAAGGCGGCCTCGCAGATCGAGGAACTTGATGGGGCGATGGACGATCTGGAGTCCAACCGGTTCGTG
TTCGGCGAGCACCACCTGACGCTTTCCGTCTTTGCCCCCTCGGTGAAGGAACTGACCGACAATCTTGCCAAGGCACGCGC
CAGCATGACCAGTGGCGGCGCAGTCGTCGCGCGCGAGGATCTCGGCCTTGAGGCGGCCTGGTGGGCGCAGCTACCGGGTA
ACTTCCGTTATAGGGCCCGGTCCGGCGCGATCACGTCACGGAACTTCGCAGCGCTGTCGCCCTTCCACTCTTATCCGCTC
GGCCAAAAGGACGGTAACGAGTGGGGACCCGCCGTCGCCCTGCTCAAGACCGCGTCCGGCTCGCCGTACTACTTCAACTT
CCATTACGGCGATCTCGGCAACACCTTCGTCTGCGGGCCGTCCGGCGCCGGCAAAACGGTGCTGCTCAACTTCATGCTGT
CGCAGCTAGAAAAGCATGATCCGCATGTGGTGTTCTTCGATAAGGACAGGGGAGCCGATCTCTACGTGCGCGCCGCCGGC
GGCACCTATCTGCCTCTCAAGAACGGCATCCCGACCGGTTGCACCCCCTTAAAGGCCCTCGAATTAACACCGGAGAACAA
GGTCTTTCTGACACGCTGGGTCGGCAAGCTGGTCGGCTCGGCGACGCGTGAACTGAGCGTGACCGAACTCCGCGACATTT
CGTCCGCCATCGACGGCCTTGCCGACCTGCCGGTCGAGCGTCGGACGATCGGCGCGCTCAGGACCTTTCTCGACAACACG
AACCCGGAAGGGATCGCAGCCAGGCTGCGGCGTTGGGAGAGGGGAGGGCCGCTCGGCTGGGTATTTGACAACGTCATCGA
GGATATCGGTTTCGGAGAATTCGGCGGTGGCAAATTGGTCGGCTACGACATGACCGACTTTCTCGACAACGAGGAAATCC
GGGCCCCGCTGATGGCCTATCTCTTCCATCGCGTCGAGCAACTGATCGACGGCCGCAGGATCATCATCGTTATCGACGAG
TTCTGGAAAGCGCTCCAGGACGAAGGGTTCCGCGATCTCGCGCAGAACAAGCTCAAGACGATCCGCAAGCAGAACGGCCT
CATGCTGTTTGCGACACAGAGCCCGCGCGACGCGATCGTCTCGCCGATCGCTCACACCATCATCGAGCAATGCCCGACAC
AGATCTTCCTGCCGAACTCCCGCGGCAATCATGGCGACTATGTCGATGGCTTCAAGCTGACGGAGCGCGAATTCGAGCTG
GTCGCGCGTGAGCTCTCCATTGAGAGCCGGCGGTTCGTGTTGAAGCAGGGACATAACAGCGTCGTCGCCGAGCTGGATCT
CAAGGGCCTCGACGACGAACTCGCCATCCTCTCCGGACGAACCGCCAATGTCGAACTTGCGGATGCGATCCGTGCGGAGG
TCGGCAGCAATGCAAAGGATTGGCTTCCCGTTTTCCAGCAAAGAAGGAGTGCGACCTGA

Protein sequence :
MPSLTTLRSRELGPETFIPYVRHVDESTIALDSRALMVMIALEGVSFETADILDLNALHRDLNTLYRNIADERLALWTHL
IRRRDNSYPEGTFATPFSAALNDKYRERMVGEDLFRNDLYLSILWSPARDPADKAAKLLSRLRRARRVGTELDEGALKHL
RDKVIDVTAALRRFEPRVLTLYEHDGLMFSEPSEVLHQLVGGRREPIPLTEGHIASAIYSDRVIVGRETIEIRHEADSRY
AGMLSFKEYPARTRTGMLDAVLTSPFELILAQSFSFVSKADARMIMGRKQNQMVSSGDKAASQIEELDGAMDDLESNRFV
FGEHHLTLSVFAPSVKELTDNLAKARASMTSGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALSPFHSYPL
GQKDGNEWGPAVALLKTASGSPYYFNFHYGDLGNTFVCGPSGAGKTVLLNFMLSQLEKHDPHVVFFDKDRGADLYVRAAG
GTYLPLKNGIPTGCTPLKALELTPENKVFLTRWVGKLVGSATRELSVTELRDISSAIDGLADLPVERRTIGALRTFLDNT
NPEGIAARLRRWERGGPLGWVFDNVIEDIGFGEFGGGKLVGYDMTDFLDNEEIRAPLMAYLFHRVEQLIDGRRIIIVIDE
FWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNSRGNHGDYVDGFKLTEREFEL
VARELSIESRRFVLKQGHNSVVAELDLKGLDDELAILSGRTANVELADAIRAEVGSNAKDWLPVFQQRRSAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB4 YP_007572669.1 VirB4 type IV secretion protein VFG2233 Protein 0.0 62