|
Name : gabD4 (SM2011_a0805) Accession : YP_007572390.1 Strain : Genome accession: NC_020527 Putative virulence/resistance : Unknown Product : GabD4 succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 439461 - 440933 bp Length : 1473 bp Strand : + Note : corresponds to SMa0805 DNA sequence : ATGACGATTTCGGAAACACTTCTCGTCAAACTGAAGGATCCCAGCCTCGCTGTCGACAAGGGTTTGATCGGCGCCGAATG GCTTGACAGAAGCGACAGCGGCAAGACGTTCGATGTCAGCAATCCGGCGACCGGCGAGGTCATCGCCATCTTGCCCGACA TGAGTCGGTCCGAAACCGCACGTGCGATCGATGCGGCCCACGCGGCGCAAAGGGCATGGGCGGAGAAGACGGGCAAGGAA CGCGCCGCGGTGCTGCGCAACCTCTACGACCTCGTGGTTGCCAATGCCGACGACCTCGCCACCATCCTGACGATGGAAAT GGGTAAGCCGCTTACGGAGGCGAAGGGCGAGATTCTCTACGGCGCGTCTTACGTCGAGTGGTTTGGCGAGGAGGCGAAGC GCGTCTACGGCGACACGATTCCGGGCCACCAGCCGGACAAGCGCATCATCGTCCTCAAACAGCCGATCGGGGTCGTGGCG GCGATCACGCCGTGGAATTTTCCGAATGCGATGCTCGCCCGAAAACTGGCGCCTGCCGCTGCCGCGGGCTGCGCAGTGGT TTCGAAGCCTGCCGCGGAGACGCCGCTGTCGGCGCTGGCGCTAGCCTTGCTCGCAGAACGCGCCGGCCTGCCTGCCGGAG TCTTCAACGTTATCCTGTCGACCGATTCCGCGGAAGTTGGCAAGGAAATGTGTGCCAATGACAAGGTTCGCAAGCTGACC TTCACCGGCTCCACCAACGTCGGCAAAATACTGATGCGCCAGGGCGCCGACCAGATCATGAAGCTGGGTCTGGAACTCGG AGGCAACGCGCCGTTCATCGTCTTTGACGACGCCGATCTCGACGCCGCTGTCGAAGGCGCCATGGTCGCCAAGTACCGCA ACAACGGGCAGACCTGCGTCTGCGCCAATAGGATTTTCGTGCAGGCCGGAATTTACGACGCCTTTGCCGCGAGGCTGACT GCCAAGGTTAGCGAGATGACGATCGGCGACGGGTTTGAGCCGGACGTCGACGCTGGCCCGCTGATCTCCGAAAAGGCTCT CGCCAAGGTCGAGGAACATATCCGGGACGCGGTAACGAAGGGTGCCGATCTGGTTCTGGGCGGCAATGCGCGGGGCGGAT TGTTTTTCGAGCCGACCGTCCTGACCGGAGCCACCATGGACATGAAGATTGCTGGCGAGGAGACGTTCGGCCCCGTCGCG CCGCTCTTCAAGTTCGAGACCGAGAATGAAGTTGTCAGTATGGCCAACAAGACCGAGTTCGGCTTAGCATCCTATTTTTA CTCCAAGGATGTGAGTAAGGTATTCCGCGTGGCGGAAGCGCTAGAATACGGCATGGTGGGCATCAATACAGGCCTGATCT CTACGGAAGTAGCGCCCTTCGGCGGTGTCAAGCAGTCGGGGCAAGGCCGCGAAGGCTCCAAATACGGCATCGATGACTAT GTGGAAACCAAGTATCTTTGCCTCAGTATTTGA Protein sequence : MTISETLLVKLKDPSLAVDKGLIGAEWLDRSDSGKTFDVSNPATGEVIAILPDMSRSETARAIDAAHAAQRAWAEKTGKE RAAVLRNLYDLVVANADDLATILTMEMGKPLTEAKGEILYGASYVEWFGEEAKRVYGDTIPGHQPDKRIIVLKQPIGVVA AITPWNFPNAMLARKLAPAAAAGCAVVSKPAAETPLSALALALLAERAGLPAGVFNVILSTDSAEVGKEMCANDKVRKLT FTGSTNVGKILMRQGADQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVAKYRNNGQTCVCANRIFVQAGIYDAFAARLT AKVSEMTIGDGFEPDVDAGPLISEKALAKVEEHIRDAVTKGADLVLGGNARGGLFFEPTVLTGATMDMKIAGEETFGPVA PLFKFETENEVVSMANKTEFGLASYFYSKDVSKVFRVAEALEYGMVGINTGLISTEVAPFGGVKQSGQGREGSKYGIDDY VETKYLCLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-122 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-66 | 41 |
