|
Name : rhtA (SM2011_a2414) Accession : YP_007573235.1 Strain : Genome accession: NC_020527 Putative virulence/resistance : Virulence Product : RhtA rhizobactin transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1314082 - 1316322 bp Length : 2241 bp Strand : + Note : corresponds to SMa2414 DNA sequence : ATGGGCAACAATGAGAATGGCGGCATAAGCTTTTGCGTCTTCGTCGTCGTAATTGGATTTGGCACGGGTGCTGTTGCGCA GGAGCCAGCGAATCAATCCGAAGCTGTGACGAGCCTGGAAGAAATCGTAGTCACCGGCGGACGATCCGCTCAGCAGATTT CTGAAATCGCGCGCACCATTTACGTCGTCGATTCGGATCAGATCCAGGCCGAGGCCCGGTCGGGCAAGACGCTGCAGCAG ATTCTGGGCGAAACCATTCCGAGCTTCGACCCCGCCAGCGACGGAGCGCGTACGTCATTCGGCCAGAACCTGCGTGGCCG GCCACCACTGATCCTTGTCGACGGTGTCTCGATGAACTCGGCGCGCTCGCTGAGCCGACAATTCGATGCCATCGATCCAT TCAACATCGAACGGGTGGAGGTCCTGTCTGGGGCAACTGCAATCTACGGCGGGAACGCAACCGGCGGCATCATCAACATC ATCACGAAGAAGGGCAAGGACGCGGAACCGGGCCTGCATGCGGAAGTGACCGGCGGCATGGGCAGCGGCTTTGCCGGCAG CCAGGACTTCGACCGCAATGCGGCGGGTGCGGTCACCTATAACAGCGAAAACTGGGATGCCCGCCTTTCGATCGCCGGCA ACAGGACCGGCGCCTTTTATGACGGCAGCGGCACGCTGCTGATCCCCGACATCACGCAGACGTCCACCGCATTCAACGAG CGCATCGACCTGATGGGGTCTATCGGCTACCAGATCGACGACGACCGTCGCGTCGAATTTTCCGGGCAATATTTCGACAG CAAGCAGGACTCGGATTACGGGCTTTATTACGGGCCCTTCTTTGCAGCGCTCGCCGACCCGAGCCTGTTTGAAACCCGTT CCGGATACGAGTCCGACTTCAATCCGCAGACACGCCGCTCGATGTTGAACGTCACCTATACCGATAATGACGTTTTCGGT CAGCAGCTATTGCTTCAGGGATCTTACCGGACTGAGCGGATAAAGTTCCATCCCTTCCCTGCTTCGGGCAATAGCGAAAC GGGTCCTTACTTTTACGGCAGTTCGCAGGACACAGACTATTACGGCATCAGGGCTGCCTTGGTTGCGGAACCCACCGACG CGCTGAAAATCACCTATGGCATCGATGCGGATATGGATTCCTTCACGGCGCGTCAGAACATCTTCGACATGGTGGCAGCC GGGCAATCCGGGGGGCTCGATTTCAATACGATCGGCAAGACCGGTCTTTATCCATCCATCGATGTCTCCACCGTTGCCGG CTTTGCTGAGGCCTCGTACGAGGCTACCGACAGGCTCACTCTGAACGGCGGGGTGCGCTATCAGTTCGTCAACACTGAGG TATCCGACTTCATCGGAGCGGCTCAGCAGGTCGCCATCCTGCAGGGCAGAGCAACGTCTGCCGACACCATACCTGGCGGC GAAGTCAATTACGACGCCGCTTTGTTCAGTGCAGGCGCAACCTACCAGTTGACGAATACGCAGCAGGTCTACGCCAATTT CAGCCAGGGCTTCGAACTACCAGATCCGGCCAAGTACTATGGAATTGGCAACTACTCCTTCTCCGGTGGACACTACACGC TTGTCAATAGCGTGAACGTGGGCGATTCCGCGCTCGAGGCGATCAAGACCAACTCATTCGAAATCGGCTATCGTCTCGAT GACGGCACCTTCAATCTTGAAACGGCGGCCTACTACTCGCTCTCCGATCGTTCCATCAATCTCAATCGCTCATCGCTTGC CGTTGAGATCATCGATCGGGAGAGACGCGTCTATGGCATCGAAGGAAAGGCGGGCGTAAAGCTCGATCATGGCTTCGATG TTGGAGTTCTGGGGCACTGGGTCAGAACCGAGGTCAAGGGAGCCGACGGTTGGGAAAAGGACTCCGTCGGCAGCGCGAGC GTCTCCAAACTCGGCGGCTATGTCGGCTGGACCAATGACGCTCTCAGCCTGAGGTTTTCCGGTCAGCACATCTTCGAACT CACCGACGCCCAGAATTTCACGATCGACGATTATACGTTGTTTGATCTAACCGGCGGCTACAGGTTCGAGAATACCGACA CGACGCTGAATTTCGGTATCCATAACGTCTTCGATACTGATTACACCACCGTCTGGGGCTCTCGCGCCAAAGCCCTTTAC GGCGGCCTAGCCGACGAGTCGGTGTTCGACTACAAGGGCCGCGGCCGCACGTTCGCGGTCTCGCTGACAAAGGTTTTTTA A Protein sequence : MGNNENGGISFCVFVVVIGFGTGAVAQEPANQSEAVTSLEEIVVTGGRSAQQISEIARTIYVVDSDQIQAEARSGKTLQQ ILGETIPSFDPASDGARTSFGQNLRGRPPLILVDGVSMNSARSLSRQFDAIDPFNIERVEVLSGATAIYGGNATGGIINI ITKKGKDAEPGLHAEVTGGMGSGFAGSQDFDRNAAGAVTYNSENWDARLSIAGNRTGAFYDGSGTLLIPDITQTSTAFNE RIDLMGSIGYQIDDDRRVEFSGQYFDSKQDSDYGLYYGPFFAALADPSLFETRSGYESDFNPQTRRSMLNVTYTDNDVFG QQLLLQGSYRTERIKFHPFPASGNSETGPYFYGSSQDTDYYGIRAALVAEPTDALKITYGIDADMDSFTARQNIFDMVAA GQSGGLDFNTIGKTGLYPSIDVSTVAGFAEASYEATDRLTLNGGVRYQFVNTEVSDFIGAAQQVAILQGRATSADTIPGG EVNYDAALFSAGATYQLTNTQQVYANFSQGFELPDPAKYYGIGNYSFSGGHYTLVNSVNVGDSALEAIKTNSFEIGYRLD DGTFNLETAAYYSLSDRSINLNRSSLAVEIIDRERRVYGIEGKAGVKLDHGFDVGVLGHWVRTEVKGADGWEKDSVGSAS VSKLGGYVGWTNDALSLRFSGQHIFELTDAQNFTIDDYTLFDLTGGYRFENTDTTLNFGIHNVFDTDYTTVWGSRAKALY GGLADESVFDYKGRGRTFAVSLTKVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iutA | AAK71635.1 | IutA | Virulence | SHI-3 | Protein | 1e-117 | 42 |
| iutA | NP_839219.1 | ferric siderophore receptor | Virulence | SHI-2 | Protein | 1e-116 | 41 |
| iutA | NP_709458.2 | ferric siderophore receptor | Virulence | SHI-2 | Protein | 1e-116 | 41 |
| iutA | AAD44750.1 | IutA | Virulence | SHI-2 | Protein | 2e-116 | 41 |
| iutA | YP_002414042.1 | Ferric aerobactin receptor | Virulence | Not named | Protein | 2e-116 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rhtA | YP_007573235.1 | RhtA rhizobactin transporter | VFG1085 | Protein | 6e-118 | 42 |
| rhtA | YP_007573235.1 | RhtA rhizobactin transporter | VFG0619 | Protein | 5e-117 | 41 |
| rhtA | YP_007573235.1 | RhtA rhizobactin transporter | VFG0936 | Protein | 8e-117 | 41 |
